Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs7158663
MEG3
0.827 0.240 14 100853087 non coding transcript exon variant A/G snv 0.42 9
rs4919510
SEMA4G ; MIR608 ; MRPL43
0.641 0.520 10 100975021 mature miRNA variant C/G snv 0.27 0.27 32
rs1416580204
MOK
0.608 0.720 14 102250837 missense variant C/T snv 4.0E-06 7.0E-06 49
rs28362491
LOC105377621 ; NFKB1
0.592 0.720 4 102500998 non coding transcript exon variant ATTG/- delins 56
rs35866072
MMP8
0.716 0.360 11 102713373 missense variant T/G snv 6.0E-02 9.8E-02 17
rs34009635
MMP8
0.716 0.360 11 102713445 missense variant A/G snv 2.5E-03 6.2E-04 17
rs751402
ERCC5 ; BIVM-ERCC5
0.724 0.360 13 102845848 5 prime UTR variant A/G snv 0.76 15
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs3740393
BORCS7-ASMT ; AS3MT
0.776 0.280 10 102876898 intron variant G/C;T snv 10
rs745564626
XRCC3 ; KLC1
0.752 0.280 14 103699003 missense variant C/G;T snv 4.3E-05 14
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs1326656542
LIG4
0.776 0.280 13 108210293 missense variant A/T snv 4.0E-06 10
rs1805388
LIG4
0.790 0.120 13 108211243 missense variant G/A snv 0.18 0.16 11
rs189037
ATM ; NPAT
0.689 0.400 11 108223106 5 prime UTR variant G/A snv 0.49 22
rs664677
ATM
0.807 0.160 11 108272455 intron variant C/A;T snv 0.65 8
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 39
rs664143
C11orf65 ; ATM
0.807 0.160 11 108354934 3 prime UTR variant A/G;T snv 8
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs12415607
CASP7
0.827 0.160 10 113678445 upstream gene variant C/A snv 0.22 7