Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1057519697
ALK
0.776 0.120 2 29220830 missense variant A/C snv 12
rs1057519847
EGFR
0.570 0.560 7 55191821 missense variant CT/AG mnv 72
rs1057519848
EGFR
0.570 0.560 7 55191822 missense variant TG/GT mnv 72
rs1057519861
EGFR ; EGFR-AS1
0.776 0.080 7 55181398 missense variant T/A snv 15
rs1057520001
TP53
0.677 0.360 17 7674886 missense variant A/C;G snv 23
rs10680577
RAB4B-EGLN2 ; EGLN2
0.776 0.160 19 40798690 intron variant -/TACT delins 10
rs10877887
LINC01465 ; MIRLET7I
0.701 0.440 12 62603400 non coding transcript exon variant T/C snv 0.42 18
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10937405
TP63
0.807 0.080 3 189665394 intron variant C/T snv 0.38 9
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs11568820
VDR
0.672 0.480 12 47908762 intron variant C/T snv 0.38 27
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913530
KRAS
0.583 0.640 12 25245351 missense variant C/A;G;T snv 63
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs12415607
CASP7
0.827 0.160 10 113678445 upstream gene variant C/A snv 0.22 7
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs12914385
CHRNA3
0.790 0.160 15 78606381 intron variant C/A;T snv 18
rs13042395
SLC52A3
0.752 0.160 20 773867 intron variant C/T snv 5.9E-02 13
rs132770
DESI1 ; XRCC6
0.752 0.320 22 41621260 5 prime UTR variant A/G snv 0.83 14