Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs180349 0.925 0.200 11 116741111 intergenic variant A/C;T snv 5
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 10
rs2160669
ZPR1
1.000 0.040 11 116776891 3 prime UTR variant C/T snv 0.92 5
rs2266788
APOA5 ; ZPR1
0.763 0.440 11 116789970 3 prime UTR variant G/A snv 0.93 19
rs3135506
APOA5
0.708 0.400 11 116791691 missense variant G/A;C snv 3.0E-05; 6.8E-02 26
rs481843
LINC02702
1.000 0.040 11 116655150 non coding transcript exon variant C/T snv 8.8E-02 5
rs651821
APOA5
0.851 0.360 11 116791863 5 prime UTR variant C/T snv 0.88 0.89 17
rs6589566
ZPR1
0.882 0.080 11 116781707 intron variant G/A;C;T snv 10
rs6589567 1.000 0.040 11 116799960 intergenic variant A/C;G;T snv 4
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33
rs7350481 0.882 0.040 11 116715567 regulatory region variant T/C snv 0.93 8
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs10468017
ALDH1A2
0.851 0.120 15 58386313 intron variant C/T snv 0.24 12
rs1532085
ALDH1A2
0.882 0.080 15 58391167 intron variant A/G;T snv 13
rs2043085
ALDH1A2
0.827 0.080 15 58388755 intron variant T/C snv 0.54 9
rs6494005
ALDH1A2 ; LIPC
1.000 0.040 15 58432325 non coding transcript exon variant A/G snv 0.38 5
rs173539 0.882 0.080 16 56954132 intergenic variant C/T snv 0.33 11
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 18
rs1864163
CETP
0.882 0.120 16 56963321 intron variant G/A snv 0.26 10
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 20
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs708272
CETP
0.708 0.440 16 56962376 intron variant G/A snv 0.42 0.38 24
rs711752
CETP
1.000 0.040 16 56962299 splice region variant G/A;C snv 10
rs9939224
CETP
1.000 0.040 16 56968820 intron variant T/G snv 0.75 6