Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs673548
APOB
0.925 0.120 2 21014672 intron variant G/A;T snv 14
rs769450
APOE
0.925 0.120 19 44907187 non coding transcript exon variant G/A snv 0.39 5
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 10
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 20
rs765547 0.827 0.160 8 20008763 intergenic variant G/A;C;T snv 18
rs780092
GCKR
0.827 0.160 2 27520287 intron variant A/G snv 0.18 10
rs9282541
ABCA1
0.790 0.160 9 104858554 missense variant G/A snv 1.3E-02 4.4E-03 13
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs180349 0.925 0.200 11 116741111 intergenic variant A/C;T snv 5
rs1535
FADS2
0.752 0.240 11 61830500 intron variant A/G snv 0.31 24
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 18
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 30
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs102275
TMEM258
0.827 0.320 11 61790331 non coding transcript exon variant T/C snv 0.47 18
rs651821
APOA5
0.851 0.360 11 116791863 5 prime UTR variant C/T snv 0.88 0.89 17
rs3135506
APOA5
0.708 0.400 11 116791691 missense variant G/A;C snv 3.0E-05; 6.8E-02 26
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs2266788
APOA5 ; ZPR1
0.763 0.440 11 116789970 3 prime UTR variant G/A snv 0.93 19
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 19
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs708272
CETP
0.708 0.440 16 56962376 intron variant G/A snv 0.42 0.38 24
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33