COL1A2, collagen type I alpha 2 chain, 1278

N. diseases: 271; N. variants: 178
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1554397369
rs1554397369
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
T 0.700 GeneticVariation CLINVAR
dbSNP: rs1562906570
rs1562906570
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
T 0.700 GeneticVariation CLINVAR
dbSNP: rs193922159
rs193922159
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 GeneticVariation CLINVAR
dbSNP: rs193922162
rs193922162
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 GeneticVariation CLINVAR
dbSNP: rs193922165
rs193922165
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 GeneticVariation CLINVAR
dbSNP: rs193922166
rs193922166
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
T 0.700 GeneticVariation CLINVAR
dbSNP: rs193922167
rs193922167
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
T 0.700 GeneticVariation CLINVAR
dbSNP: rs193922168
rs193922168
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
C 0.700 GeneticVariation CLINVAR
dbSNP: rs193922173
rs193922173
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 GeneticVariation CLINVAR
dbSNP: rs193922175
rs193922175
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
C 0.700 GeneticVariation CLINVAR
dbSNP: rs72656387
rs72656387
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 CausalMutation CLINVAR
dbSNP: rs72658154
rs72658154
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 GeneticVariation CLINVAR
dbSNP: rs72658193
rs72658193
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 CausalMutation CLINVAR
dbSNP: rs72659305
rs72659305
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 CausalMutation CLINVAR
dbSNP: rs72659319
rs72659319
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
A 0.700 CausalMutation CLINVAR
dbSNP: rs67865220
rs67865220
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.020 GeneticVariation BEFREE Bioinformatics analysis showed p.G337 was well-conserved among multiple species and the mutation probably changed the structure and damaged the function of collagen.We suggest that the mutation p.G337C in the COL1A2 gene is pathogenic for OI by affecting the protein structure and the function of collagen. 28953610 2017
dbSNP: rs67865220
rs67865220
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.020 GeneticVariation BEFREE The mutations p.Gly257Arg, p.Gly767Ser and p.Gly821Ser in COL1A1 and p.Gly337Ser in COL1A2 may be located at a mutation hotspot for human OI due to the high repetition rate in OI patients. 27748872 2016
dbSNP: rs121912905
rs121912905
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.020 GeneticVariation BEFREE Thermal stability of type I collagen molecules containing the substitution was decreased, but to a lesser extent than for a nonlethal cysteine for glycine substitution at residue 259 of alpha 2(I), indicating that this measure of molecular stability may be of limited use in explaining the pathogenesis of osteogenesis imperfecta. 1301191 1992
dbSNP: rs121912905
rs121912905
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.020 GeneticVariation BEFREE A child with a moderately severe form of osteogenesis imperfecta was heterozygous for a G to T transition that resulted in a substitution of cysteine for glycine at position 259 in the COL1A2 gene. 1990009 1991
dbSNP: rs66612022
rs66612022
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE Haplotype analysis of the COL1A2 gene revealed that four probands from five independent OI probands with c.982G>A (p.Gly328Ser) had a common haplotype. 16705691 2006
dbSNP: rs72658176
rs72658176
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE We report two sibs with severe, progressively deforming osteogenesis imperfecta (OI) and homozygosity by descent for a glycine 751 to serine substitution in the alpha2(I) collagen chain due to a G to A transition in the COL1A2 gene. 9099837 1997
dbSNP: rs1310067676
rs1310067676
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE Gly802Asp substitution in the pro alpha 2(I) collagen chain in a family with recurrent osteogenesis imperfecta due to paternal mosaicism. 8800927 1996
dbSNP: rs121912910
rs121912910
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE Three unrelated individuals with perinatally lethal osteogenesis imperfecta resulting from identical Gly502Ser substitutions in the alpha 2-chain of type I collagen. 7959683 1994
dbSNP: rs72656392
rs72656392
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE Substitution of cysteine for glycine-946 in the alpha 1(I) chain of type I procollagen causes lethal osteogenesis imperfecta. 7961597 1994
dbSNP: rs72659306
rs72659306
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
CUI: C0029434
Disease:
Osteogenesis Imperfecta
0.010 GeneticVariation BEFREE Mild dominant osteogenesis imperfecta with intrafamilial variability: the cause is a serine for glycine alpha 1(I) 901 substitution in a type-I collagen gene. 1634225 1992