VCAN, versican, 1462

N. diseases: 205; N. variants: 16
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs115912456
rs115912456
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0424621
Disease:
Body Fat Distribution
G 0.700 GeneticVariation GWASCAT Genome-wide association study of body fat distribution identifies adiposity loci and sex-specific genetic effects. 30664634 2019
dbSNP: rs34580448
rs34580448
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0424678
Disease:
Lean body mass
0.700 GeneticVariation GWASCAT Genomics of body fat percentage may contribute to sex bias in anorexia nervosa. 30593698 2019
dbSNP: rs2287926
rs2287926
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0424678
Disease:
Lean body mass
0.700 GeneticVariation GWASCAT Large meta-analysis of genome-wide association studies identifies five loci for lean body mass. 28724990 2017
dbSNP: rs310518
rs310518
Entrez Id: 1462;107986431
Gene Symbol: VCAN;LOC107986431
VCAN;LOC107986431
CUI: C0280324
Disease:
Laryngeal Squamous Cell Carcinoma
0.700 GeneticVariation GWASCAT Genome-wide association study identifies three susceptibility loci for laryngeal squamous cell carcinoma in the Chinese population. 25194280 2014
dbSNP: rs397515437
rs397515437
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
A 0.700 CausalMutation CLINVAR Novel VCAN mutations and evidence for unbalanced alternative splicing in the pathogenesis of Wagner syndrome. 22739342 2013
dbSNP: rs80356553
rs80356553
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
A 0.700 CausalMutation CLINVAR De novo splice mutation in the versican gene in a family with Wagner syndrome. 23571384 2013
dbSNP: rs80356554
rs80356554
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
C 0.700 CausalMutation CLINVAR Novel VCAN mutations and evidence for unbalanced alternative splicing in the pathogenesis of Wagner syndrome. 22739342 2013
dbSNP: rs80356554
rs80356554
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 CausalMutation CLINVAR Targeted sequencing of 179 genes associated with hereditary retinal dystrophies and 10 candidate genes identifies novel and known mutations in patients with various retinal diseases. 23462753 2013
dbSNP: rs864309744
rs864309744
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
A 0.700 CausalMutation CLINVAR A family with Wagner syndrome with uveitis and a new versican mutation. 24174867 2013
dbSNP: rs10514258
rs10514258
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C0032460
Disease:
Polycystic Ovary Syndrome
0.700 GeneticVariation GWASDB Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3. 21151128 2011
dbSNP: rs80356555
rs80356555
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
G 0.700 CausalMutation CLINVAR A new VCAN/versican splice acceptor site mutation in a French Wagner family associated with vascular and inflammatory ocular features. 21738396 2011
dbSNP: rs80356555
rs80356555
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 CausalMutation CLINVAR A new VCAN/versican splice acceptor site mutation in a French Wagner family associated with vascular and inflammatory ocular features. 21738396 2011
dbSNP: rs80356553
rs80356553
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 CausalMutation CLINVAR Mutational hot spot potential of a novel base pair mutation of the CSPG2 gene in a family with Wagner syndrome. 19901218 2009
dbSNP: rs80356553
rs80356553
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 CausalMutation CLINVAR Clinical characterisation and molecular analysis of Wagner syndrome. 17035272 2007
dbSNP: rs80356553
rs80356553
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 CausalMutation CLINVAR Identification of the genetic defect in the original Wagner syndrome family. 16636652 2006
dbSNP: rs80356554
rs80356554
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
A 0.700 CausalMutation CLINVAR Erosive vitreoretinopathy and wagner disease are caused by intronic mutations in CSPG2/Versican that result in an imbalance of splice variants. 16877430 2006
dbSNP: rs80356556
rs80356556
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
A 0.700 CausalMutation CLINVAR Erosive vitreoretinopathy and wagner disease are caused by intronic mutations in CSPG2/Versican that result in an imbalance of splice variants. 16877430 2006
dbSNP: rs80356556
rs80356556
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
C 0.700 CausalMutation CLINVAR Erosive vitreoretinopathy and wagner disease are caused by intronic mutations in CSPG2/Versican that result in an imbalance of splice variants. 16877430 2006
dbSNP: rs80356555
rs80356555
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
G 0.700 CausalMutation CLINVAR Identification of a novel splice site mutation of the CSPG2 gene in a Japanese family with Wagner syndrome. 16043844 2005
dbSNP: rs80356553
rs80356553
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C1840452
Disease:
Hyaloideoretinal degeneration of Wagner
T 0.700 GeneticVariation CLINVAR
dbSNP: rs173686
rs173686
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0007766
Disease:
Intracranial Aneurysm
0.020 GeneticVariation BEFREE The data do not support the hypothesis that the two SNPs (rs173686 and rs251124) in the promoter region of the CSPG2 gene influence the development of intracranial aneurysms in Chinese Han nationality. 18484070 2007
dbSNP: rs173686
rs173686
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0007766
Disease:
Intracranial Aneurysm
0.020 GeneticVariation BEFREE In stage 1, we found several SNPs in strong linkage disequilibrium and haplotypes constituting these SNPs associated with IAs in the Dutch population (strongest SNP association for rs173686 with odds ratio=1.34, 95% CI=1.09 to 1.65, P=0.004). 16917090 2006
dbSNP: rs757070887
rs757070887
Entrez Id: 1462
Gene Symbol: VCAN
VCAN
CUI: C0035334
Disease:
Retinitis Pigmentosa
0.010 GeneticVariation BEFREE In one family, exome analyses of two affected individuals revealed a homozygous missense mutation (c.883G>A; p.Asp295Asn) in the AGBL5 (Agbl5; CCP5) gene, previously not reported to be associated with RP. 26720455 2015
dbSNP: rs160277
rs160277
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C0699791
Disease:
Stomach Carcinoma
0.010 GeneticVariation BEFREE Genetic variants A1826H and D2937Y in GAG-beta domain of versican influence susceptibility to intestinal-type gastric cancer. 19655167 2010
dbSNP: rs160277
rs160277
Entrez Id: 1462;105379054
Gene Symbol: VCAN;VCAN-AS1
VCAN;VCAN-AS1
CUI: C0024623
Disease:
Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE Genetic variants A1826H and D2937Y in GAG-beta domain of versican influence susceptibility to intestinal-type gastric cancer. 19655167 2010