GATA3, GATA binding protein 3, 2625

N. diseases: 429; N. variants: 30
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
A 0.800 CausalMutation CLINVAR
dbSNP: rs104894164
rs104894164
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.710 CausalMutation CLINVAR
dbSNP: rs104894162
rs104894162
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs104894165
rs104894165
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs112417755
rs112417755
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C2316810
Disease:
Chronic kidney disease stage 5
C 0.700 CausalMutation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C2316786
Disease:
Chronic kidney disease stage 2
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0452138
Disease:
Sensorineural hearing loss, bilateral
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0020626
Disease:
Hypoparathyroidism
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1843156
Disease:
Progressive sensorineural hearing impairment
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1564405163
rs1564405163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C3714581
Disease:
Multicystic Dysplastic Kidney
C 0.700 GeneticVariation CLINVAR
dbSNP: rs387906551
rs387906551
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
GCTTACTTCCC 0.700 CausalMutation CLINVAR
dbSNP: rs387906621
rs387906621
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
A 0.700 CausalMutation CLINVAR
dbSNP: rs878853222
rs878853222
Entrez Id: 2625;107984204
Gene Symbol: GATA3;LOC107984204
GATA3;LOC107984204
CUI: C1840333
Disease:
Barakat syndrome
TACCCGCCCTACGTGCCCACCACCCCATCAGCACTC 0.700 CausalMutation CLINVAR
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.800 GeneticVariation UNIPROT GATA3 haplo-insufficiency causes human HDR syndrome. 10935639 2000
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.800 GeneticVariation UNIPROT GATA3 abnormalities and the phenotypic spectrum of HDR syndrome. 11389161 2001
dbSNP: rs104894165
rs104894165
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0020626
Disease:
Hypoparathyroidism
0.010 GeneticVariation BEFREE We identified three novel mutations in the GATA3 gene responsible for familial hypoparathyroidism and deafness: 1) a frameshift deletion occurring in codon 160 (478delG) was hypothesized to disrupt dual zinc fingers as well as one transactivating domain; 2) a donor splice site mutation at exon 4/intron 4 boundary (IVS4 + 2 T to GCTTACTTCCC) was predicted to lead to truncated GATA3 proteins that lack both N- and C-terminal zinc-containing fingers; and 3) a missense mutation R353S was predicted to disrupt the helical turn and thus changed the angle between the C-terminal zinc finger and the adjacent C-terminal tail. 16912130 2006
dbSNP: rs1211413464
rs1211413464
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE This finding was relevant because GATA5 bound the site adjacent to the +331G/A polymorphism, and activated the hPR (-711 to +822)-luciferase reporter plasmid in breast cancer cells. 16452193 2006
dbSNP: rs1211413464
rs1211413464
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE This finding was relevant because GATA5 bound the site adjacent to the +331G/A polymorphism, and activated the hPR (-711 to +822)-luciferase reporter plasmid in breast cancer cells. 16452193 2006
dbSNP: rs570613
rs570613
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.020 GeneticVariation BEFREE Analyses of pooled data suggested a reduced risk of breast cancer associated with two intronic variants in GATA3 in linkage disequilibrium (rs3802604 in intron 3 and rs570613 in intron 4). 18006915 2007
dbSNP: rs570613
rs570613
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0678222
Disease:
Breast Carcinoma
0.020 GeneticVariation BEFREE Analyses of pooled data suggested a reduced risk of breast cancer associated with two intronic variants in GATA3 in linkage disequilibrium (rs3802604 in intron 3 and rs570613 in intron 4). 18006915 2007
dbSNP: rs3802604
rs3802604
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE Analyses of pooled data suggested a reduced risk of breast cancer associated with two intronic variants in GATA3 in linkage disequilibrium (rs3802604 in intron 3 and rs570613 in intron 4). 18006915 2007
dbSNP: rs3802604
rs3802604
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE Stronger associations were observed for subjects with ER-negative, than ER-positive, tumors (P(heterogeneity)=0.01 for rs3802604; P(heterogeneity)=0.09 for rs570613). 18006915 2007
dbSNP: rs3802604
rs3802604
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE Analyses of pooled data suggested a reduced risk of breast cancer associated with two intronic variants in GATA3 in linkage disequilibrium (rs3802604 in intron 3 and rs570613 in intron 4). 18006915 2007
dbSNP: rs570613
rs570613
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE Stronger associations were observed for subjects with ER-negative, than ER-positive, tumors (P(heterogeneity)=0.01 for rs3802604; P(heterogeneity)=0.09 for rs570613). 18006915 2007