GATA3, GATA binding protein 3, 2625

N. diseases: 429; N. variants: 30
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104894162
rs104894162
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.800 GeneticVariation UNIPROT GATA3 haplo-insufficiency causes human HDR syndrome. 10935639 2000
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
A 0.800 CausalMutation CLINVAR
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.800 GeneticVariation UNIPROT A novel loss-of-function mutation of GATA3 (p.R299Q) in a Japanese family with Hypoparathyroidism, Deafness, and Renal Dysplasia (HDR) syndrome. 26514990 2015
dbSNP: rs104894163
rs104894163
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.800 GeneticVariation UNIPROT GATA3 abnormalities and the phenotypic spectrum of HDR syndrome. 11389161 2001
dbSNP: rs104894164
rs104894164
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
0.710 GeneticVariation BEFREE Together with other reported cases, this study highlights the variability of HDR syndrome symptoms in individuals with the p.Arg367* mutation, emphasizing the importance of molecular analyses for correct diagnosis. 30534854 2020
dbSNP: rs104894164
rs104894164
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.710 CausalMutation CLINVAR
dbSNP: rs104894165
rs104894165
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C1840333
Disease:
Barakat syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs104894165
rs104894165
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0020626
Disease:
Hypoparathyroidism
0.010 GeneticVariation BEFREE We identified three novel mutations in the GATA3 gene responsible for familial hypoparathyroidism and deafness: 1) a frameshift deletion occurring in codon 160 (478delG) was hypothesized to disrupt dual zinc fingers as well as one transactivating domain; 2) a donor splice site mutation at exon 4/intron 4 boundary (IVS4 + 2 T to GCTTACTTCCC) was predicted to lead to truncated GATA3 proteins that lack both N- and C-terminal zinc-containing fingers; and 3) a missense mutation R353S was predicted to disrupt the helical turn and thus changed the angle between the C-terminal zinc finger and the adjacent C-terminal tail. 16912130 2006
dbSNP: rs1058240
rs1058240
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C2607914
Disease:
Allergic rhinitis (disorder)
0.010 GeneticVariation BEFREE A model with rs1058240, rs379568, and rs4143094 (GATA3) and rs1800925 (IL13) and their interactions was selected to predict rhinitis and positive SPT responses. rs1058240 was associated with rhinitis and allergic rhinitis (P < .05), and the gene-gene interaction rs1058240:rs1800925 was associated with rhinitis (P = .043). 18037162 2008
dbSNP: rs1058240
rs1058240
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0035455
Disease:
Rhinitis
0.010 GeneticVariation BEFREE A model with rs1058240, rs379568, and rs4143094 (GATA3) and rs1800925 (IL13) and their interactions was selected to predict rhinitis and positive SPT responses. rs1058240 was associated with rhinitis and allergic rhinitis (P < .05), and the gene-gene interaction rs1058240:rs1800925 was associated with rhinitis (P = .043). 18037162 2008
dbSNP: rs10905284
rs10905284
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0004096
Disease:
Asthma
C 0.700 GeneticVariation GWASCAT Moderate-to-severe asthma in individuals of European ancestry: a genome-wide association study. 30552067 2019
dbSNP: rs10905284
rs10905284
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0027430
Disease:
Nasal Polyps
C 0.700 GeneticVariation GWASCAT A loss-of-function variant in ALOX15 protects against nasal polyps and chronic rhinosinusitis. 30643255 2019
dbSNP: rs10905284
rs10905284
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0200638
Disease:
Eosinophil count procedure
A 0.700 GeneticVariation GWASCAT The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease. 27863252 2016
dbSNP: rs10905284
rs10905284
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0023343
Disease:
Leprosy
0.010 GeneticVariation BEFREE The A allele of rs10905284 marker was associated with leprosy resistance. 26807920 2016
dbSNP: rs112417755
rs112417755
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C2316810
Disease:
Chronic kidney disease stage 5
C 0.700 CausalMutation CLINVAR
dbSNP: rs11255504
rs11255504
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0741260
Disease:
Adult onset asthma
T 0.700 GeneticVariation GWASCAT Genetic Architectures of Childhood- and Adult-Onset Asthma Are Partly Distinct. 30929738 2019
dbSNP: rs11255504
rs11255504
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0004096
Disease:
Asthma
T 0.700 GeneticVariation GWASCAT Genetic Architectures of Childhood- and Adult-Onset Asthma Are Partly Distinct. 30929738 2019
dbSNP: rs1211413464
rs1211413464
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE This finding was relevant because GATA5 bound the site adjacent to the +331G/A polymorphism, and activated the hPR (-711 to +822)-luciferase reporter plasmid in breast cancer cells. 16452193 2006
dbSNP: rs1211413464
rs1211413464
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE This finding was relevant because GATA5 bound the site adjacent to the +331G/A polymorphism, and activated the hPR (-711 to +822)-luciferase reporter plasmid in breast cancer cells. 16452193 2006
dbSNP: rs1244181
rs1244181
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C0162538
Disease:
Immunoglobulin A deficiency (disorder)
0.700 GeneticVariation GWASCAT Common variants at PVT1, ATG13-AMBRA1, AHI1 and CLEC16A are associated with selective IgA deficiency. 27723758 2016
dbSNP: rs1244181
rs1244181
Entrez Id: 2625
Gene Symbol: GATA3
GATA3
CUI: C4049006
Disease:
Selective immunoglobulin A deficiency
0.700 GeneticVariation GWASCAT Common variants at PVT1, ATG13-AMBRA1, AHI1 and CLEC16A are associated with selective IgA deficiency. 27723758 2016
dbSNP: rs1244186
rs1244186
Entrez Id: 2625;399717
Gene Symbol: GATA3;GATA3-AS1
GATA3;GATA3-AS1
CUI: C0019829
Disease:
Hodgkin Disease
A 0.700 GeneticVariation GWASDB Variation at 3p24.1 and 6q23.3 influences the risk of Hodgkin's lymphoma. 24149102 2013
dbSNP: rs1269486
rs1269486
Entrez Id: 2625;399717;107984204
Gene Symbol: GATA3;GATA3-AS1;LOC107984204
GATA3;GATA3-AS1;LOC107984204
CUI: C0018213
Disease:
Graves Disease
0.010 GeneticVariation BEFREE We genotyped -1514T/C (rs17250932) and -1993T/C (rs4794067) polymorphisms of TBX21, - 742C/G polymorphism (rs2184658) of HLX and -1420G/A polymorphism (rs1269486) of GATA3 in genomic DNA samples from Japanese patients; 51 patients with severe Hashimoto's disease (HD), 39 with mild HD, 66 with intractable Graves' disease (GD), in whom remission was difficult to induce, 47 with GD in remission and 79 healthy volunteers. 22014209 2012
dbSNP: rs1269486
rs1269486
Entrez Id: 2625;399717;107984204
Gene Symbol: GATA3;GATA3-AS1;LOC107984204
GATA3;GATA3-AS1;LOC107984204
CUI: C0677607
Disease:
Hashimoto Disease
0.010 GeneticVariation BEFREE We genotyped -1514T/C (rs17250932) and -1993T/C (rs4794067) polymorphisms of TBX21, - 742C/G polymorphism (rs2184658) of HLX and -1420G/A polymorphism (rs1269486) of GATA3 in genomic DNA samples from Japanese patients; 51 patients with severe Hashimoto's disease (HD), 39 with mild HD, 66 with intractable Graves' disease (GD), in whom remission was difficult to induce, 47 with GD in remission and 79 healthy volunteers. 22014209 2012