GATA6, GATA binding protein 6, 2627

N. diseases: 162; N. variants: 11
Source: BEFREE ×
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs387906816
rs387906816
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0039685
Disease:
Tetralogy of Fallot
0.720 GeneticVariation BEFREE Three heterozygous missense mutations, c.151G>A (E51K), c.551G>A (S184N) and c.733G>C (G245R), were identified in patients with tetralogy of Fallot or persistent truncus arteriosus. 24841381 2014
dbSNP: rs387906816
rs387906816
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0039685
Disease:
Tetralogy of Fallot
0.720 GeneticVariation BEFREE The same heterozygous missense mutation (Ser184Asn) was identified in three patients, including one with tetralogy of Fallot and two with atrial septal defects. 20631719 2010
dbSNP: rs387906818
rs387906818
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0235833
Disease:
Congenital diaphragmatic hernia
0.710 GeneticVariation BEFREE In the first family, we identified a de novo missense mutation (c.1366C>T, p.R456C) in a sporadic CDH patient with tetralogy of Fallot. 24385578 2014
dbSNP: rs387906818
rs387906818
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0039685
Disease:
Tetralogy of Fallot
0.710 GeneticVariation BEFREE In the first family, we identified a de novo missense mutation (c.1366C>T, p.R456C) in a sporadic CDH patient with tetralogy of Fallot. 24385578 2014
dbSNP: rs587777710
rs587777710
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0235833
Disease:
Congenital diaphragmatic hernia
0.710 GeneticVariation BEFREE In the second, a nonsense mutation (c.712G>T, p.G238*) was identified in two siblings with CDH and a large ventricular septal defect. 24385578 2014
dbSNP: rs587777710
rs587777710
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0345140
Disease:
Totally absent pericardium
0.710 GeneticVariation BEFREE The G238* mutation was inherited from their mother, who was clinically affected with congenital absence of the pericardium, patent ductus arteriosus and intestinal malrotation. 24385578 2014
dbSNP: rs1416421760
rs1416421760
Entrez Id: 2627;100128893
Gene Symbol: GATA6;GATA6-AS1
GATA6;GATA6-AS1
CUI: C0155626
Disease:
Acute myocardial infarction
0.010 GeneticVariation BEFREE One novel heterozygous DSV, (g.22168409 A > G), and two SNPs, [g.22168362 C > A(rs1416421760) and g.22168521 G > T(rs1445501474)], were reported in three AMI patients, which were not found in controls. 31781165 2019
dbSNP: rs143085291
rs143085291
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0010068
Disease:
Coronary heart disease
0.010 GeneticVariation BEFREE Genotype analyses revealed that minor alleles in <i>TBX1</i>: rs12165908 C > G [odds ratio (OR) = 2.64; 95% confidence interval (CI) = 1.87-3.73, <i>p</i> = 3.03 × 10<sup>-8</sup>] and <i>GATA6</i>: rs143085291 C > T (OR = 2.49; 95% CI = 1.18-5.29, <i>p</i> = 0.01) increased CHD risk significantly. 31013439 2019
dbSNP: rs1445501474
rs1445501474
Entrez Id: 2627;100128893
Gene Symbol: GATA6;GATA6-AS1
GATA6;GATA6-AS1
CUI: C0155626
Disease:
Acute myocardial infarction
0.010 GeneticVariation BEFREE One novel heterozygous DSV, (g.22168409 A > G), and two SNPs, [g.22168362 C > A(rs1416421760) and g.22168521 G > T(rs1445501474)], were reported in three AMI patients, which were not found in controls. 31781165 2019
dbSNP: rs3764962
rs3764962
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0149630
Disease:
Bicuspid aortic valve
0.010 GeneticVariation BEFREE Minor alleles of p.His302=, p.Arg202Gln and rs3764962 are enriched in BAV patients compared to ExAC database (P = 0.01, 0.03, and 0.01 respectively). 30229885 2018
dbSNP: rs146243018
rs146243018
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0002962
Disease:
Angina Pectoris
0.010 GeneticVariation BEFREE 3 potentially pathogenic variants were identified: c.-77G>A in <i>GATA2</i>, p.Ala343Thr (rs370588269) in <i>GATA4</i>, and p.Pro555Ala (rs146243018) in <i>GATA6</i> Multivariate analyses showed that angina was more frequent in patients carrying sarcomeric and GATA rare variants (55% vs 23.2% in non-carriers of GATA rare variants, OR (95% CI) 7.12 (1.23 to 41.27), p=0.029). 28381408 2017
dbSNP: rs747737834
rs747737834
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0342276
Disease:
Maturity onset diabetes mellitus in young
0.010 GeneticVariation BEFREE The p.Leu77Arg but not p.Val101Met GCK mutation is therefore considered a pathogenic mutation associated with MODY. 27185633 2016
dbSNP: rs757797666
rs757797666
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C1832661
Disease:
ANOPHTHALMIA AND PULMONARY HYPOPLASIA
0.010 GeneticVariation BEFREE Gata6 expression is spontaneously lost in a mouse model of KRas(G12V)-driven PDAC, in association with altered cell differentiation. 25596178 2016
dbSNP: rs757797666
rs757797666
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0027651
Disease:
Neoplasms
0.010 GeneticVariation BEFREE We analysed genetically engineered mouse models and human pancreatic ductal adenocarcinoma (PDAC) cell lines, using a combination of histopathological studies, genome-wide expression and chromatin immunoprecipitation experiments to understand the role of Gata6 in the initiation and progression of KRas(G12V)-driven tumours 25596178 2016
dbSNP: rs757797666
rs757797666
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C1335302
Disease:
Pancreatic Ductal Adenocarcinoma
0.010 GeneticVariation BEFREE We analysed genetically engineered mouse models and human pancreatic ductal adenocarcinoma (PDAC) cell lines, using a combination of histopathological studies, genome-wide expression and chromatin immunoprecipitation experiments to understand the role of Gata6 in the initiation and progression of KRas(G12V)-driven tumours 25596178 2016
dbSNP: rs368858287
rs368858287
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0039685
Disease:
Tetralogy of Fallot
0.010 GeneticVariation BEFREE Three heterozygous missense mutations, c.151G>A (E51K), c.551G>A (S184N) and c.733G>C (G245R), were identified in patients with tetralogy of Fallot or persistent truncus arteriosus. 24841381 2014
dbSNP: rs587777710
rs587777710
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0238521
Disease:
VENTRICULAR SEPTAL DEFECT, LARGE
0.010 GeneticVariation BEFREE In the second, a nonsense mutation (c.712G>T, p.G238*) was identified in two siblings with CDH and a large ventricular septal defect. 24385578 2014
dbSNP: rs587777710
rs587777710
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0221210
Disease:
Congenital malrotation of intestine
0.010 GeneticVariation BEFREE The G238* mutation was inherited from their mother, who was clinically affected with congenital absence of the pericardium, patent ductus arteriosus and intestinal malrotation. 24385578 2014
dbSNP: rs387906816
rs387906816
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0018817
Disease:
Atrial Septal Defects
0.010 GeneticVariation BEFREE The same heterozygous missense mutation (Ser184Asn) was identified in three patients, including one with tetralogy of Fallot and two with atrial septal defects. 20631719 2010
dbSNP: rs387906816
rs387906816
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
CUI: C0010068
Disease:
Coronary heart disease
0.010 GeneticVariation BEFREE All these data suggest that GATA6 Ser184Asn is a novel mutation associated with CHDs and has an important role in disease pathogenesis. 20631719 2010