HLA-F-AS1, HLA-F antisense RNA 1, 285830

N. diseases: 4; N. variants: 10
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2523393
rs2523393
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0026769
Disease:
Multiple Sclerosis 		A 0.800 GeneticVariation GWASDB Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. 19525953 2009
dbSNP: rs2523393
rs2523393
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0026769
Disease:
Multiple Sclerosis 		A 0.800 GeneticVariation GWASCAT Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. 19525953 2009
dbSNP: rs1633096
rs1633096
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0152266
Disease:
Mixed Cellularity Hodgkin Lymphoma 		0.710 GeneticVariation GWASCAT Additionally, independent loci within the HLA region are observed for nodular sclerosis Hodgkin lymphoma (rs9269081, HLA-DPB1*03:01, Val86 in HLA-DRB1) and mixed cellularity Hodgkin lymphoma (rs1633096, rs13196329, Val86 in HLA-DRB1). 29196614 2017
dbSNP: rs1633096
rs1633096
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0152266
Disease:
Mixed Cellularity Hodgkin Lymphoma 		0.710 GeneticVariation BEFREE Additionally, independent loci within the HLA region are observed for nodular sclerosis Hodgkin lymphoma (rs9269081, HLA-DPB1*03:01, Val86 in HLA-DRB1) and mixed cellularity Hodgkin lymphoma (rs1633096, rs13196329, Val86 in HLA-DRB1). 29196614 2017
dbSNP: rs1610601
rs1610601
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0003872
Disease:
Arthritis, Psoriatic 		0.700 GeneticVariation GWASCAT Genetic variation at the glycosaminoglycan metabolism pathway contributes to the risk of psoriatic arthritis but not psoriasis. 30552173 2019
dbSNP: rs2523405
rs2523405
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0027404
Disease:
Narcolepsy 		0.700 GeneticVariation GWASDB Genome-wide association database developed in the Japanese Integrated Database Project. 19629137 2009
dbSNP: rs2735057
rs2735057
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0027404
Disease:
Narcolepsy 		0.700 GeneticVariation GWASDB Genome-wide association database developed in the Japanese Integrated Database Project. 19629137 2009
dbSNP: rs1059174
rs1059174
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0026769
Disease:
Multiple Sclerosis 		0.700 GeneticVariation GWASDB Risk alleles for multiple sclerosis identified by a genomewide study. 17660530 2007
dbSNP: rs1610603
rs1610603
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0026769
Disease:
Multiple Sclerosis 		0.700 GeneticVariation GWASDB Risk alleles for multiple sclerosis identified by a genomewide study. 17660530 2007
dbSNP: rs1736921
rs1736921
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0026769
Disease:
Multiple Sclerosis 		0.700 GeneticVariation GWASDB Risk alleles for multiple sclerosis identified by a genomewide study. 17660530 2007
dbSNP: rs2735059
rs2735059
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0178468
Disease:
Autoimmune thyroid disease 		0.010 GeneticVariation BEFREE One of them was as follows: rs2072895 (non_synonymous_coding & splice-site) and rs2735059 (non_synonymous_coding) → HLA-F → type I diabetes mellitus, antigen processing and presentation, and autoimmune thyroid disease. 22201026 2012
dbSNP: rs2735059
rs2735059
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent 		0.010 GeneticVariation BEFREE One of them was as follows: rs2072895 (non_synonymous_coding & splice-site) and rs2735059 (non_synonymous_coding) → HLA-F → type I diabetes mellitus, antigen processing and presentation, and autoimmune thyroid disease. 22201026 2012
dbSNP: rs885945
rs885945
Entrez Id: 3134;285830
Gene Symbol: HLA-F;HLA-F-AS1
HLA-F;HLA-F-AS1
CUI: C1275685
Disease:
Avellino corneal dystrophy 		0.010 GeneticVariation BEFREE One SNP marker (rs885945) neighboring the gene encoding major histocompatibility complex class I F (HLA-F) was significantly associated with the risk of Avellino corneal dystrophy (P=0.0003). rs885945 showed high LD with SNPs within the HLA-F gene. 19622345 2009