GRN, granulin precursor, 2896

N. diseases: 412; N. variants: 66
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs543578531
rs543578531
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0750901
Disease:
Alzheimer Disease, Early Onset
0.010 GeneticVariation BEFREE In addition, a heterozygous p.Arg71Trp mutation in PSEN2 with an uncertain pathogenic nature was identified in a patient with neuropathologically confirmed AD. 31127772 2019
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0494463
Disease:
Alzheimer Disease, Late Onset
0.010 GeneticVariation BEFREE This strategy identified three 3'UTR SNPs, rs10876135, rs5848, and rs5786996 that may alter the respective binding sites for the miRNAs hsa-miR-197-5p, hsa-miR-185-5p, and hsa-miR-34a-5p, all of which are upregulated in LOAD. 28286146 2017
dbSNP: rs1567885728
rs1567885728
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
A 0.700 GeneticVariation CLINVAR
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE Alzheimer's Disease Neuroimaging Initiative cohort (ADNI; n=237) data, combining both multiplexed proteomics CSF and genotype data, were used to assess the association between CSF analytes and risk SNPs in four genes (SNPs): GRN (rs5848), TMEM106B (rs1990622), ABCC9 (rs704180), and KCNMB2 (rs9637454). 28189700 2017
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE Stratified analyses showed associations of rs5848 with increased risk of AD and PD in the homozygous and recessive models. 25578179 2015
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE The homozygous TT genotype of rs5848 may play a role in the genetic risk of AD development, especially in the elderly. 21212639 2011
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE Genetic studies demonstrate an association of the common GRN rs5848 variant that results in reduced PGRN levels with increased risk for AD. 28070672 2017
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE Similarly, the mRNA levels of granulin were decreased with respect to A allele of rs5848 in the inferior temporal cortex of neuropathologically confirmed AD patients. 22890097 2013
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE Our data indicate that TT allele of rs5848 is associated with increased risk of AD, suggesting that genetic variant of progranulin gene may play an important role in AD development. 24680777 2014
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE However, stratification according to gender revealed a significant male-specific allele, genotype and haplotype association between AD and GRN SNPs rs4792939, rs850713, and rs5848. 19016491 2009
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002395
Disease:
Alzheimer's Disease
0.080 GeneticVariation BEFREE The result of the meta-analysis supported T allele of rs5848 within GRN as a risk factor for AD. 26820675 2017
dbSNP: rs63751294
rs63751294
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.020 GeneticVariation BEFREE The neuropathology of an affected family member of a patient with the PGRN R493X mutation appears not to be Alzheimer's disease. 16983677 2006
dbSNP: rs63751294
rs63751294
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.020 GeneticVariation BEFREE In 37 patients with Arg493X from 30 families with FTLD, clinical diagnoses included frontotemporal dementia, primary progressive aphasia, corticobasal syndrome, and Alzheimer's disease.Range of onset age was 44-69 years. 17826340 2007
dbSNP: rs1291370551
rs1291370551
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE We identified 2 patients with AD and 1 patient with PD who carried the null mutation IVS0 + 5G>C, which we reported earlier in an extensively characterized Belgian founder family, DR8, segregating FTLDU. 17923627 2007
dbSNP: rs1372439127
rs1372439127
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE The PSEN1, p.E318G variant increases the risk of Alzheimer's disease in APOE-ε4 carriers. 23990795 2013
dbSNP: rs4792939
rs4792939
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE However, stratification according to gender revealed a significant male-specific allele, genotype and haplotype association between AD and GRN SNPs rs4792939, rs850713, and rs5848. 19016491 2009
dbSNP: rs533451404
rs533451404
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE It leads to an amino acidic change (p.Gly35Arg) and was observed in a patient with late onset AD. 18752597 2008
dbSNP: rs756612865
rs756612865
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE In addition, we identified in PGRN only 1 other null mutation, the nonsense mutation p.Arg535X, in 1 patient with probable AD. 17923627 2007
dbSNP: rs34424835
rs34424835
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE Moreover, common variants (rs9897526, rs34424835, and rs850713) and haplotypes were significantly associated with a reduction in age at onset and a shorter survival after onset of ALS in both the Belgian and the Dutch studies. 18184915 2008
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE The purpose of this meta-analysis was to investigate the association between progranulin polymorphism rs5848 and risk of the neurodegenerative diseases frontotemporal lobar degeneration (FTLD), Alzheimer's disease (AD), Parkinson's disease (PD), and amyotrophic lateral sclerosis (ALS). 25578179 2015
dbSNP: rs63750043
rs63750043
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE Missense changes were identified in an ALS-FTD patient (p.S120Y) and in a single case of limb onset sporadic ALS (p.T182M), although the pathogenicity of these variants remains unclear. 17371905 2007
dbSNP: rs63750479
rs63750479
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE Missense changes were identified in an ALS-FTD patient (p.S120Y) and in a single case of limb onset sporadic ALS (p.T182M), although the pathogenicity of these variants remains unclear. 17371905 2007
dbSNP: rs850713
rs850713
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE Moreover, common variants (rs9897526, rs34424835, and rs850713) and haplotypes were significantly associated with a reduction in age at onset and a shorter survival after onset of ALS in both the Belgian and the Dutch studies. 18184915 2008
dbSNP: rs772784579
rs772784579
Entrez Id: 2896
Gene Symbol: GRN
GRN
CUI: C4302185
Disease:
Atypical Parkinsonism
0.010 GeneticVariation BEFREE We identified a new missense (GRN p.T487I) mutation in a female patient with undefined atypical parkinsonism. 29530724 2018
dbSNP: rs5848
rs5848
Entrez Id: 2896;284069
Gene Symbol: GRN;FAM171A2
GRN;FAM171A2
CUI: C0853193
Disease:
Bipolar I disorder
0.010 GeneticVariation BEFREE The presence of the polymorphic variant of the rs5848 single nucleotide polymorphism is protective for the development of bipolar I disorder (BD-I) (odds ratio = 0.55, 95% confidence interval: 0.33-0.93; p = 0.024) but not bipolar II disorder (BD-II) (p > 0.05). 24499389 2014