Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1042140
rs1042140
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C4016208
Disease:
BERYLLIUM DISEASE, CHRONIC, SUSCEPTIBILITY TO
G 0.700 SusceptibilityMutation CLINVAR
dbSNP: rs1042140
rs1042140
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C3887938
Disease:
Deuteranomaly
0.010 GeneticVariation BEFREE One described Human Leukocyte Antigen gene variant, HLA-DP beta 1*0201, contains a substitution of glutamate for lysine at position 69 that appears to have high sensitivity (approximately 94%) but low specificity (approximately 70%) with respect to CBD among individuals occupationally exposed to respirable beryllium. 10795342 2000
dbSNP: rs1367728
rs1367728
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0011854
Disease:
Diabetes Mellitus, Insulin-Dependent
0.700 GeneticVariation GWASDB A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene. 17632545 2007
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study. 17804836 2007
dbSNP: rs987870
rs987870
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study. 17804836 2007
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0019163
Disease:
Hepatitis B
0.900 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
dbSNP: rs3135021
rs3135021
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0019163
Disease:
Hepatitis B
0.710 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
dbSNP: rs2301220
rs2301220
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0019163
Disease:
Hepatitis B
0.700 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
dbSNP: rs9277341
rs9277341
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0019163
Disease:
Hepatitis B
0.700 GeneticVariation GWASDB A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians. 19349983 2009
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis. 19503088 2009
dbSNP: rs9277341
rs9277341
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis. 19503088 2009
dbSNP: rs987870
rs987870
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis. 19503088 2009
dbSNP: rs1431403
rs1431403
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761 2011
dbSNP: rs9277359
rs9277359
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761 2011
dbSNP: rs9277377
rs9277377
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761 2011
dbSNP: rs9277378
rs9277378
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761 2011
dbSNP: rs928976
rs928976
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0003873
Disease:
Rheumatoid Arthritis
0.700 GeneticVariation GWASDB A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis. 21156761 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0524909
Disease:
Hepatitis B, Chronic
0.760 GeneticVariation BEFREE A genome-wide association study identified single nucleotide polymorphisms (SNPs) rs3077 and rs9277535 located in the 3' untranslated regions of human leukocyte antigen (HLA) class II genes HLA-DPA1 and HLA-DPB1, respectively, as the independent variants most strongly associated with chronic hepatitis B. 21346778 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0019163
Disease:
Hepatitis B
0.900 GeneticVariation BEFREE HLA - DPA1 rs3077 T was strongly associated with decreased risk of chronic HBV infection (odds ratio, .62; P = .001), consistent with the previous report. 21402545 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C2239176
Disease:
Liver carcinoma
0.740 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C1623038
Disease:
Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0023890
Disease:
Liver Cirrhosis
0.010 GeneticVariation BEFREE However, rs3077 was not associated with the development of cirrhosis or hepatocellular carcinoma. 21402545 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0524909
Disease:
Hepatitis B, Chronic
0.760 GeneticVariation BEFREE Chronic hepatitis B susceptibility loci in HLA-DP region (rs3077 and rs9277535) identified by genome-wide scan in Japanese population were validated in Chinese population. 21408128 2011
dbSNP: rs2071349
rs2071349
Entrez Id: 3113;3115
Gene Symbol: HLA-DPA1;HLA-DPB1
HLA-DPA1;HLA-DPB1
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic
0.010 GeneticVariation BEFREE Conditional haplotype analysis revealed three other SNPs, rs204890 (OR = 1.86, p = 1.2 × 10(-4)), rs2071349 (OR = 1.53, p = 1.0 × 10(-3)), and rs2844580 (OR = 1.43, p = 1.3 × 10(-3)), to be associated with SLE independent of the rs9271366 SNP. 21695597 2011
dbSNP: rs3077
rs3077
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C0019163
Disease:
Hepatitis B
G 0.900 GeneticVariation GWASCAT A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population. 21750111 2011