NPHP1, nephrocystin 1, 4867

N. diseases: 126; N. variants: 11
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs765263671
rs765263671
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0687120
Disease:
Nephronophthisis
A 0.700 CausalMutation CLINVAR Mutation analysis in nephronophthisis using a combined approach of homozygosity mapping, CEL I endonuclease cleavage, and direct sequencing. 18076122 2008
dbSNP: rs766524637
rs766524637
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0687120
Disease:
Nephronophthisis
GT 0.700 CausalMutation CLINVAR Stop codon at arginine 586 is the prevalent nephronopthisis type 1 mutation in Italy. 16762963 2006
dbSNP: rs121907898
rs121907898
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
T 0.700 CausalMutation CLINVAR
dbSNP: rs121907898
rs121907898
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0687120
Disease:
Nephronophthisis
T 0.700 CausalMutation CLINVAR
dbSNP: rs121907899
rs121907899
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
T 0.700 CausalMutation CLINVAR
dbSNP: rs121907899
rs121907899
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0687120
Disease:
Nephronophthisis
T 0.700 CausalMutation CLINVAR
dbSNP: rs1233478832
rs1233478832
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
A 0.700 CausalMutation CLINVAR
dbSNP: rs1553484094
rs1553484094
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
G 0.700 CausalMutation CLINVAR
dbSNP: rs747861275
rs747861275
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
A 0.700 CausalMutation CLINVAR
dbSNP: rs747861275
rs747861275
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0687120
Disease:
Nephronophthisis
A 0.700 CausalMutation CLINVAR
dbSNP: rs766524637
rs766524637
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C4551979
Disease:
Nephronophthisis 1
GT 0.700 CausalMutation CLINVAR
dbSNP: rs190983114
rs190983114
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0752166
Disease:
Bardet-Biedl Syndrome
0.010 GeneticVariation BEFREE In vivo functional modeling in zebrafish embryos demonstrated that c.14G>T is a loss-of-function variant, and suppression of nphp1 in concert with each of the primary BBS loci found in our NPHP1-positive pedigrees exacerbated the severity of the phenotype. 24746959 2014
dbSNP: rs755276263
rs755276263
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0431399
Disease:
Familial aplasia of the vermis
0.010 GeneticVariation BEFREE Our studies confirm that a T615P mutation represents the most common mutation in the RPGRIP1L gene causing disease in about 8-10% of JS type B patients negative for NPHP1, NPHP6, or AHI1 mutations. 17960139 2007
dbSNP: rs1215288938
rs1215288938
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0020258
Disease:
Hydrocephalus, Normal Pressure
0.010 GeneticVariation BEFREE We screened a population of 68 Italian children (10 multiplex families, 47 sporadic cases) with a clinical and histopathologic picture of NPH and found a large homozygous deletion at 2q13 involving nephrocystin in 30 cases, and heterozygous deletion associated with new point mutations at exons 15 (Tyr518Ter) and 17 (Arg585Ter) of the gene in two other cases. 10620543 2000
dbSNP: rs547352656
rs547352656
Entrez Id: 4867
Gene Symbol: NPHP1
NPHP1
CUI: C0020258
Disease:
Hydrocephalus, Normal Pressure
0.010 GeneticVariation BEFREE We screened a population of 68 Italian children (10 multiplex families, 47 sporadic cases) with a clinical and histopathologic picture of NPH and found a large homozygous deletion at 2q13 involving nephrocystin in 30 cases, and heterozygous deletion associated with new point mutations at exons 15 (Tyr518Ter) and 17 (Arg585Ter) of the gene in two other cases. 10620543 2000