PGR, progesterone receptor, 5241

N. diseases: 392; N. variants: 33
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11224571
rs11224571
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C1445957
Disease:
Serum total cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11224571
rs11224571
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0428474
Disease:
Serum LDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11224571
rs11224571
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0202117
Disease:
Low density lipoprotein cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0202117
Disease:
Low density lipoprotein cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0428472
Disease:
Serum HDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0202236
Disease:
Triglycerides measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C1445957
Disease:
Serum total cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0428474
Disease:
Serum LDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs11571151
rs11571151
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0392885
Disease:
High density lipoprotein measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs7928851
rs7928851
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0428474
Disease:
Serum LDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs7928851
rs7928851
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C1445957
Disease:
Serum total cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs7928851
rs7928851
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0202117
Disease:
Low density lipoprotein cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE Patients carrying rs1042838 G/T, rs590688 C/C, and rs10895068 G/A genotypes had higher risk of breast cancer, while carriage of rs3740753 G/G genotype was associated with marginal reduction in breast cancer risk. 29302853 2020
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE Patients carrying rs1042838 G/T, rs590688 C/C, and rs10895068 G/A genotypes had higher risk of breast cancer, while carriage of rs3740753 G/G genotype was associated with marginal reduction in breast cancer risk. 29302853 2020
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE We did not observe an association between potential functional genetic polymorphisms in the estrogen pathway, SHBG rs6259, ESR1 rs2234693, CYP19 rs10046 and rs4775936, and UGT1A1 rs8175347, or the progesterone pathway, PGR rs1042838, with the risk of breast cancer. 23935996 2013
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE We did not observe an association between potential functional genetic polymorphisms in the estrogen pathway, SHBG rs6259, ESR1 rs2234693, CYP19 rs10046 and rs4775936, and UGT1A1 rs8175347, or the progesterone pathway, PGR rs1042838, with the risk of breast cancer. 23935996 2013
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE We conclude that the leucine allele of the V660L SNP may be associated with a small increase in breast cancer risk, while the other four PGR SNPs, +44C/T (rs518162), +331G/A (rs10895068), H770H (rs1042839) and Q886Q (rs500760), do not substantially increase breast cancer risk. 17592773 2008
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE We conclude that the leucine allele of the V660L SNP may be associated with a small increase in breast cancer risk, while the other four PGR SNPs, +44C/T (rs518162), +331G/A (rs10895068), H770H (rs1042839) and Q886Q (rs500760), do not substantially increase breast cancer risk. 17592773 2008
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE After both stages, only one SNP was significantly associated with an increased risk of breast cancer - the PGR-12 (rs1042638) V660L valine to leucine polymorphism [VL heterozygotes (odds ratio, 1.13; 95% confidence interval, 1.03-1.24) and the LL homozygotes (odds ratio, 1.30; 95% confidence interval, 0.98-1.73), P(het) = 0.008, P(trend) = 0.002]. 16614108 2006
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE After both stages, only one SNP was significantly associated with an increased risk of breast cancer - the PGR-12 (rs1042638) V660L valine to leucine polymorphism [VL heterozygotes (odds ratio, 1.13; 95% confidence interval, 1.03-1.24) and the LL homozygotes (odds ratio, 1.30; 95% confidence interval, 0.98-1.73), P(het) = 0.008, P(trend) = 0.002]. 16614108 2006
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE Overall, our study does not support an association between the Val660-->Leu PROGINS polymorphism and breast cancer risk. 15535845 2004
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE Overall, our study does not support an association between the Val660-->Leu PROGINS polymorphism and breast cancer risk. 15535845 2004
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0678222
Disease:
Breast Carcinoma
0.060 GeneticVariation BEFREE The progesterone receptor exon 4 Val660Leu G/T polymorphism and risk of breast cancer in Australian women. 12010857 2002
dbSNP: rs1042838
rs1042838
Entrez Id: 5241
Gene Symbol: PGR
PGR
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.060 GeneticVariation BEFREE The progesterone receptor exon 4 Val660Leu G/T polymorphism and risk of breast cancer in Australian women. 12010857 2002
dbSNP: rs10895068
rs10895068
Entrez Id: 5241;101054525
Gene Symbol: PGR;PGR-AS1
PGR;PGR-AS1
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.040 GeneticVariation BEFREE Furthermore, carriage of rs10895068</span> minor allele in breast cancer women were also associated with age at first pregnancy, hormone receptor (RH) status, and previous use of oral contraceptives. 29302853 2020