Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs4299376
rs4299376
Entrez Id: 64241;102725159
Gene Symbol: ABCG8;LOC102725159
ABCG8;LOC102725159
CUI: C0001948
Disease:
Alcohol consumption
T 0.700 GeneticVariation GWASCAT Multiancestry Genome-Wide Association Study of Lipid Levels Incorporating Gene-Alcohol Interactions. 30698716 2019
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0740277
Disease:
Bile duct carcinoma
0.010 GeneticVariation BEFREE Carriers of the CG genotype of ABCG8 rs11887534 had higher risk of biliary stones [odds ratio (OR) = 2.3, 95% confidence interval (CI) 0.82-6.5), gallbladder cancer (OR = 4.3, 95% CI 1.7-10.4) and bile duct cancer (OR = 1.94, 95% CI 0.64-5.91), compared with carriers of the GG genotype. 21062971 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0242216
Disease:
Biliary calculi
0.700 GeneticVariation GWASCAT Genome-wide association meta-analysis yields 20 loci associated with gallstone disease. 30504769 2018
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0242216
Disease:
Biliary calculi
C 0.700 GeneticVariation GWASCAT Four Susceptibility Loci for Gallstone Disease Identified in a Meta-analysis of Genome-Wide Association Studies. 27094239 2016
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0242216
Disease:
Biliary calculi
C 0.700 GeneticVariation GWASCAT Variants in ABCG8 and TRAF3 genes confer risk for gallstone disease in admixed Latinos with Mapuche Native American ancestry. 30692554 2019
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0242216
Disease:
Biliary calculi
C 0.700 GeneticVariation GWASCAT A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease. 17632509 2007
dbSNP: rs4245791
rs4245791
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0242216
Disease:
Biliary calculi
T 0.700 GeneticVariation GWASCAT Four Susceptibility Loci for Gallstone Disease Identified in a Meta-analysis of Genome-Wide Association Studies. 27094239 2016
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0750952
Disease:
Biliary Tract Cancer
0.020 GeneticVariation BEFREE Our findings suggest that ABCG8 rs11887534, identified as a gallstone risk single-nucleotide polymorphism by whole genome scan, is also associated with an increased risk of biliary tract cancer. 21062971 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0750952
Disease:
Biliary Tract Cancer
0.020 GeneticVariation BEFREE In this general population cohort, ABCG8 D19H genotype was an important predictor of both symptomatic gallstone disease and biliary cancer. 21274884 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0201657
Disease:
C-reactive protein measurement
C 0.700 GeneticVariation GWASCAT Bivariate genome-wide association study identifies novel pleiotropic loci for lipids and inflammation. 27286809 2016
dbSNP: rs4299376
rs4299376
Entrez Id: 64241;102725159
Gene Symbol: ABCG8;LOC102725159
ABCG8;LOC102725159
CUI: C0007222
Disease:
Cardiovascular Diseases
0.700 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0007222
Disease:
Cardiovascular Diseases
0.020 GeneticVariation BEFREE In a Cox proportional hazard regression model adjusted for relevant cardiovascular risk factors, the D19H polymorphism was not associated with total CVD risk (p=0.2), but there was evidence of an association with higher risk of CHD (RR 1.42, CI 1.04-1.95; p=0.03). 18977479 2009
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0007222
Disease:
Cardiovascular Diseases
0.020 GeneticVariation BEFREE It is supposed that the coexistence of higher insulin resistance and hypercholesterolemia for carriers of the D19H polymorphism may result in a greater risk of cardiovascular disease. 18581044 2008
dbSNP: rs137852988
rs137852988
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0007222
Disease:
Cardiovascular Diseases
0.010 GeneticVariation BEFREE The ABCG8 G574R variant, serum plant sterol levels, and cardiovascular disease risk in the Old Order Amish. 23241408 2013
dbSNP: rs4148217
rs4148217
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0007222
Disease:
Cardiovascular Diseases
0.010 GeneticVariation BEFREE Therefore, we examined associations between the D19H and T400K polymorphisms in the ABCG8 gene and CVD in a large cohort study of 2012 patients with heterozygous familial hypercholesterolemia (FH). 18977479 2009
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0206698
Disease:
Cholangiocarcinoma
0.010 GeneticVariation BEFREE Carriers of the CG genotype of ABCG8 rs11887534 had higher risk of biliary stones [odds ratio (OR) = 2.3, 95% confidence interval (CI) 0.82-6.5), gallbladder cancer (OR = 4.3, 95% CI 1.7-10.4) and bile duct cancer (OR = 1.94, 95% CI 0.64-5.91), compared with carriers of the GG genotype. 21062971 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
C 0.800 GeneticVariation GWASDB A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease. 17632509 2007
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE In retrospective controlled study, we determined D19H polymorphism of ABCG8 gene, genetic variation at Niemann-Pick C1-like 1 (NPC1L1) gene locus (rs41279633, rs17655652, rs2072183, rs217434 and rs2073548), and serum cholesterol, noncholesterol sterols and lipids in children affected by gallstones decades later (n = 66) and controls (n = 126). 29764733 2018
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE In the genotype model, the overall association between genotype with gallstone was significant for D19H (OR = 2.43, 95%CI: 2.23-2.64, P<0.001), and for Y54C (OR = 1.36, 95%CI: 1.01-1.83, P = 0.044), or T400K (OR = 1.17, 95%CI: 0.96-1.43.P = 0.110). 24498041 2014
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE Carriers of the DH genotype and H allele of the ABCG8 D19H polymorphism harbor a higher risk for gallstone susceptibility in the northern Indian population. 21039838 2010
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE ABCG8-D19H is a predictor of gallstone recurrence, a major long term postoperative biliary complication. 22869156 2013
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE Mutational analysis of ABCB4, screening for copy number variations by multiplex ligation-dependent probe amplification, genotyping for low expression allele c.1331T>C of ABCB11 and genotyping for variation c.55G>C in ABCG8 previously associated with cholesterol gallstones in adults was performed in 35 pediatric subjects with idiopathic gallstones who fulfilled the clinical criteria for low phospholipid-associated cholelithiasis syndrome (LPAC, OMIM #600803) and in 5 young females with suspected LPAC and their families (5 probands, 15 additional family members). 24914347 2014
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE The fraction of all gallstones attributed to D19H was 11%. 21274884 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE To investigate a possible association between transporter gene polymorphism and gallstone formation, we examined five common polymorphisms in the ABCG5 (Q604E) and ABCG8 (D19H, Y54C, T400K, A632V) genes in patients with gallstone disease (GS). 17612515 2007
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.800 GeneticVariation BEFREE Consistent with the mouse model, heterozygosity for the lithogenic ABCG8 allele was associated with gallstones in humans; 21.4% of gallstone patients carried the heterozygous D19H genotype, compared with 8.6% of controls (OR = 2.954; P = 0.026). 17626266 2007