Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs749661564
rs749661564
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0947622
Disease:
Cholecystolithiasis
0.010 GeneticVariation BEFREE Five of the gallstone associations are protein-altering variants, and three (HNF4A p.Thr139Ile, SERPINA1 p.Glu366Lys, and SLC10A2 p.Pro290Ser) conferred per-allele odds ratios for gallstone disease of 1.30-1.36. 30325047 2019
dbSNP: rs749661564
rs749661564
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0008350
Disease:
Cholelithiasis
0.010 GeneticVariation BEFREE Five of the gallstone associations are protein-altering variants, and three (HNF4A p.Thr139Ile, SERPINA1 p.Glu366Lys, and SLC10A2 p.Pro290Ser) conferred per-allele odds ratios for gallstone disease of 1.30-1.36. 30325047 2019
dbSNP: rs4299376
rs4299376
Entrez Id: 64241;102725159
Gene Symbol: ABCG8;LOC102725159
ABCG8;LOC102725159
CUI: C0016977
Disease:
Gall Bladder Diseases
0.010 GeneticVariation BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
dbSNP: rs4953023
rs4953023
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0016977
Disease:
Gall Bladder Diseases
0.010 GeneticVariation BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
dbSNP: rs6544718
rs6544718
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0016977
Disease:
Gall Bladder Diseases
0.010 GeneticVariation BEFREE We identify two new loci associated with GBD, GCKR rs1260326:T>C (P = 5.88 × 10(-7), ß = -0.146) and TTC39B rs686030:C>A (P = 6.95 x 10(-7), ß = 0.271) and detect four independent SNP effects in ABCG8 rs4953023:G>A (P=7.41 × 10(-47), ß = 0.734), ABCG8 rs4299376:G(>)T (P = 2.40 × 10(-18), ß = 0.278), ABCG5 rs6544718:T>C (P = 2.08 × 10(-14), ß = 0.044) and ABCG5 rs6720173:G>C (P = 3.81 × 10(-12), ß(=)0.262) in conditional analyses taking genotypes of rs4953023:G>A as a covariate. 25920552 2016
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0011881
Disease:
Diabetic Nephropathy
0.010 GeneticVariation BEFREE No significant association was found between the D19H polymorphism and the risk of diabetic nephropathy. 25804128 2015
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C2609268
Disease:
Low phospholipid-associated cholelithiasis
0.010 GeneticVariation BEFREE Mutational analysis of ABCB4, screening for copy number variations by multiplex ligation-dependent probe amplification, genotyping for low expression allele c.1331T>C of ABCB11 and genotyping for variation c.55G>C in ABCG8 previously associated with cholesterol gallstones in adults was performed in 35 pediatric subjects with idiopathic gallstones who fulfilled the clinical criteria for low phospholipid-associated cholelithiasis syndrome (LPAC, OMIM #600803) and in 5 young females with suspected LPAC and their families (5 probands, 15 additional family members). 24914347 2014
dbSNP: rs1209143268
rs1209143268
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0302314
Disease:
Xanthoma
0.010 GeneticVariation BEFREE A known mutation, c.490C>T (p. Arg164(*)), in exon 4 and a novel mutation, c.1949T>G (p.Leu650Arg), in exon 13 of ABCG8 were detected in the proband and her sister, who had elevated sterols but low LDL-C levels and no xanthomas. 25056759 2014
dbSNP: rs137852988
rs137852988
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0007222
Disease:
Cardiovascular Diseases
0.010 GeneticVariation BEFREE The ABCG8 G574R variant, serum plant sterol levels, and cardiovascular disease risk in the Old Order Amish. 23241408 2013
dbSNP: rs6756629
rs6756629
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0008350
Disease:
Cholelithiasis
0.010 GeneticVariation BEFREE ABCG5 rs6756629 is in strong linkage disequilibrium with rs11887534 (D19H), a variant previously associated with gallstone disease risk in populations of European-descent. 24256507 2013
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0206698
Disease:
Cholangiocarcinoma
0.010 GeneticVariation BEFREE Carriers of the CG genotype of ABCG8 rs11887534 had higher risk of biliary stones [odds ratio (OR) = 2.3, 95% confidence interval (CI) 0.82-6.5), gallbladder cancer (OR = 4.3, 95% CI 1.7-10.4) and bile duct cancer (OR = 1.94, 95% CI 0.64-5.91), compared with carriers of the GG genotype. 21062971 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0740277
Disease:
Bile duct carcinoma
0.010 GeneticVariation BEFREE Carriers of the CG genotype of ABCG8 rs11887534 had higher risk of biliary stones [odds ratio (OR) = 2.3, 95% confidence interval (CI) 0.82-6.5), gallbladder cancer (OR = 4.3, 95% CI 1.7-10.4) and bile duct cancer (OR = 1.94, 95% CI 0.64-5.91), compared with carriers of the GG genotype. 21062971 2011
dbSNP: rs4148217
rs4148217
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0153452
Disease:
Malignant neoplasm of gallbladder
0.010 GeneticVariation BEFREE Carriers of the ABCG8 haplotype C-C (rs4148217-rs11887534) had a 4.16-fold (95% CI 1.71-10.1) risk of gallbladder cancer compared with those carrying the C-G haplotype. 21062971 2011
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C0010054
Disease:
Coronary Arteriosclerosis
0.010 GeneticVariation BEFREE Effect of genetic variant (rs11887534) in ABCG8 gene in coronary artery disease and response to atorvastatin therapy. 20592455 2010
dbSNP: rs11887534
rs11887534
Entrez Id: 64240;64241
Gene Symbol: ABCG5;ABCG8
ABCG5;ABCG8
CUI: C1956346
Disease:
Coronary Artery Disease
0.010 GeneticVariation BEFREE Effect of genetic variant (rs11887534) in ABCG8 gene in coronary artery disease and response to atorvastatin therapy. 20592455 2010
dbSNP: rs1205128669
rs1205128669
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0008350
Disease:
Cholelithiasis
0.010 GeneticVariation BEFREE In our study we investigated the contribution of heterozygosity for common variations considered either potentially pathogenic or susceptibility alleles for cholesterol cholelithiasis in adults (c.523A>G (p.Thr175Ala) and c.1954A>G (p.Arg652Gly) in ABCB4, c.1331T>C (p.Val444Ala) in ABCB11 and c.55 G>C (p.Asp19His) in ABCG8) to the aetiology of paediatric idiopathic gallstone disease. 20163776 2010
dbSNP: rs1205128669
rs1205128669
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0856727
Disease:
Cholesterol gallstones
0.010 GeneticVariation BEFREE In our study we investigated the contribution of heterozygosity for common variations considered either potentially pathogenic or susceptibility alleles for cholesterol cholelithiasis in adults (c.523A>G (p.Thr175Ala) and c.1954A>G (p.Arg652Gly) in ABCB4, c.1331T>C (p.Val444Ala) in ABCB11 and c.55 G>C (p.Asp19His) in ABCG8) to the aetiology of paediatric idiopathic gallstone disease. 20163776 2010
dbSNP: rs1205128669
rs1205128669
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0856727
Disease:
Cholesterol gallstones
0.010 GeneticVariation BEFREE In our study we investigated the contribution of heterozygosity for common variations considered either potentially pathogenic or susceptibility alleles for cholesterol cholelithiasis in adults (c.523A>G (p.Thr175Ala) and c.1954A>G (p.Arg652Gly) in ABCB4, c.1331T>C (p.Val444Ala) in ABCB11 and c.55 G>C (p.Asp19His) in ABCG8) to the aetiology of paediatric idiopathic gallstone disease. 20163776 2010
dbSNP: rs1205128669
rs1205128669
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0008350
Disease:
Cholelithiasis
0.010 GeneticVariation BEFREE In our study we investigated the contribution of heterozygosity for common variations considered either potentially pathogenic or susceptibility alleles for cholesterol cholelithiasis in adults (c.523A>G (p.Thr175Ala) and c.1954A>G (p.Arg652Gly) in ABCB4, c.1331T>C (p.Val444Ala) in ABCB11 and c.55 G>C (p.Asp19His) in ABCG8) to the aetiology of paediatric idiopathic gallstone disease. 20163776 2010
dbSNP: rs41360247
rs41360247
Entrez Id: 64241;102725159
Gene Symbol: ABCG8;LOC102725159
ABCG8;LOC102725159
CUI: C1956346
Disease:
Coronary Artery Disease
0.010 GeneticVariation BEFREE Alleles of ABCG8 and ABO associated with elevated phytosterol levels displayed significant associations with increased CAD risk (rs4245791 odds ratio, 1.10; 95% CI, 1.06 to 1.14; P=2.2 x 10(-6); rs657152 odds ratio, 1.13; 95% CI, 1.07 to 1.19; P=9.4 x 10(-6)), whereas alleles at ABCG8 associated with reduced phytosterol levels were associated with reduced CAD risk (rs41360247 odds ratio, 0.84; 95% CI, 0.78 to 0.91; P=1.3 x 10(-5)). 20529992 2010
dbSNP: rs4148217
rs4148217
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0029438
Disease:
Massive Osteolyses
0.010 GeneticVariation BEFREE SNP D19H, but not SNP T400K, in the ABCG8 gene is significantly associated with GSD in an Indian population. 20594224 2010
dbSNP: rs4148217
rs4148217
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0017495
Disease:
Gerstmann-Straussler-Scheinker Disease
0.010 GeneticVariation BEFREE SNP D19H, but not SNP T400K, in the ABCG8 gene is significantly associated with GSD in an Indian population. 20594224 2010
dbSNP: rs4148217
rs4148217
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0856727
Disease:
Cholesterol gallstones
0.010 GeneticVariation BEFREE Studies have identified single nucleotide polymorphisms (SNP) D19H and T400K in the cholesterol transporter gene ATP-binding cassette, subfamily G, member 8 (ABCG8) in patients with cholesterol gallstones. 20594224 2010
dbSNP: rs4245791
rs4245791
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C1956346
Disease:
Coronary Artery Disease
0.010 GeneticVariation BEFREE Alleles of ABCG8 and ABO associated with elevated phytosterol levels displayed significant associations with increased CAD risk (rs4245791 odds ratio, 1.10; 95% CI, 1.06 to 1.14; P=2.2 x 10(-6); rs657152 odds ratio, 1.13; 95% CI, 1.07 to 1.19; P=9.4 x 10(-6)), whereas alleles at ABCG8 associated with reduced phytosterol levels were associated with reduced CAD risk (rs41360247 odds ratio, 0.84; 95% CI, 0.78 to 0.91; P=1.3 x 10(-5)). 20529992 2010
dbSNP: rs6544718
rs6544718
Entrez Id: 64241
Gene Symbol: ABCG8
ABCG8
CUI: C0948008
Disease:
Ischemic stroke
0.010 GeneticVariation BEFREE Determinations of allele frequencies of four common ABCG8 polymorphisms (D19H, Y54C, T400K, and A632V) were carried out in 241 unrelated patients with ischemic stroke, 148 patients with coronary heart disease, and 191 blood donors (controls). 20854103 2010