SHH, sonic hedgehog signaling molecule, 6469

N. diseases: 171; N. variants: 7
Source: BEFREE ×
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104894049
rs104894049
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C1840235
Disease:
SOLITARY MEDIAN MAXILLARY CENTRAL INCISOR
0.810 GeneticVariation BEFREE Missense mutation in the SHH gene (I111F) at 7q36 may be associated with SMMCI. 16722608 2006
dbSNP: rs587778792
rs587778792
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C0079541
Disease:
Holoprosencephaly
0.710 GeneticVariation BEFREE Here, we analyze seven reported missense mutations (G31R, D88V, Q100H, N115K, W117G, W117R, and E188Q) that alter the N-terminal signaling domain of Shh protein, and show that two of these mutations (Q100H and E188Q), which are questionably linked to HPE, produce no detectable effects on function. 16282375 2005
dbSNP: rs587778799
rs587778799
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C0079541
Disease:
Holoprosencephaly
0.710 GeneticVariation BEFREE Here, we analyze seven reported missense mutations (G31R, D88V, Q100H, N115K, W117G, W117R, and E188Q) that alter the N-terminal signaling domain of Shh protein, and show that two of these mutations (Q100H and E188Q), which are questionably linked to HPE, produce no detectable effects on function. 16282375 2005
dbSNP: rs780893190
rs780893190
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C0007129
Disease:
Merkel cell carcinoma
0.010 GeneticVariation BEFREE The high rate of c.576G>A silent mutation in GLI1 exon 5 was a feature of MCC. 28551328 2017
dbSNP: rs104894040
rs104894040
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.010 GeneticVariation BEFREE These results mainly underline the potential role of SHH3 rs104894040 349 T/C gene polymorphism in the development of skin basal cell carcinomas in patients of Polish origin. 26590974 2016
dbSNP: rs104894040
rs104894040
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C3811653
Disease:
Experimental Organism Basal Cell Carcinoma
0.010 GeneticVariation BEFREE The presence of CC genotype in the SHH rs104894040 349 T/C polymorphism was linked to the highest risk of BCC development (OR 87.9, p < 0.001). 26590974 2016
dbSNP: rs104894049
rs104894049
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C4721806
Disease:
Carcinoma, Basal Cell
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs104894049
rs104894049
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C3811653
Disease:
Experimental Organism Basal Cell Carcinoma
0.010 GeneticVariation BEFREE Other genotypes, such as the TT in SHH rs104894049 331 A/T and the GG in SMO rs41303402 385 G/A also statistically raised the risk of BCC, but these associations were weaker. 26590974 2016
dbSNP: rs1233560
rs1233560
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C1827293
Disease:
Carcinoma of urinary bladder, invasive
0.010 GeneticVariation BEFREE Nine SNPs reached a nominally significant individual association with recurrence of NMIBC in patients who received transurethral resection (TUR) only (P ≤ 0.05), of which two (SHH rs1233560 and GLI2 rs11685068) were replicated independently in 356 TUR-only NMIBC patients, with P values of 1.0 × 10(-3) (SHH rs1233560) and 1.3 × 10(-3) (GLI2 rs11685068). 20858759 2010
dbSNP: rs208684
rs208684
Entrez Id: 6469
Gene Symbol: SHH
SHH
CUI: C4721666
Disease:
Bladder cancer stage IV
0.010 GeneticVariation BEFREE Although three SNPs (GLI2 rs735557, GLI2 rs4848632, and SHH rs208684) showed nominal significance in association with overall survival in MiMBC patients (P ≤ 0.05), none remained significant after multiple-comparison adjustments. 20858759 2010