SLC12A4, solute carrier family 12 member 4, 6560

N. diseases: 23; N. variants: 12
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0242339
Disease:
Dyslipidemias
0.010 GeneticVariation BEFREE Results revealed significant differences in rs670 and rs2292318 allele frequencies between cases and controls (P<0.025). rs670 G allele carriers were more likely to develop dyslipidemia than A allele carriers (OR = 1.315, OR 95% CI: 1.067-2.620; P = 0.010). rs2292318 T allele carriers were more likely to develop dyslipidemia than A allele carriers (OR = 1.264, OR 95% CI: 1.037-1.541; P = 0.020). 29758034 2018
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0742343
Disease:
Acute Chest Syndrome
0.010 GeneticVariation BEFREE Two CETP gene polymorphisms (rs4783961 and rs708272) and one LCAT polymorphism (rs2292318) were genotyped by 5' exonuclease TaqMan assays in 619 patients with ACS and 607 control individuals. 29570220 2018
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C3160761
Disease:
Diabetic dyslipidaemia
0.010 GeneticVariation BEFREE LPL (rs320), LIPC (rs2070895), SCARB1 (rs5888), LCAT (rs2292318), CETP (rs708272), ADIPOQ (rs1501299), RETN (rs3745367), and MNSOD (rs4880) polymorphisms play an important role in basic molecular metabolism in diabetic dyslipidemia. 28315561 2017
dbSNP: rs749574144
rs749574144
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.010 GeneticVariation BEFREE Amelioration of circulating lipoprotein profile and proteinuria in a patient with LCAT deficiency due to a novel mutation (Cys74Tyr) in the lid region of LCAT under a fat-restricted diet and ARB treatment. 23522979 2013
dbSNP: rs781370503
rs781370503
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE We detected reduced KCC2 messenger RNA levels and less membrane-bound KCC2 immunoreactivity in ALS-vulnerable motoneurons in lumbar spinal cord and hypoglossal nuclei of SOD1-G93A mice but not in degeneration-resistant oculomotor nuclei. 20838240 2010
dbSNP: rs560140762
rs560140762
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.010 GeneticVariation BEFREE T13M mutation of LCAT gene causes FED. 15115696 2004
dbSNP: rs3785100
rs3785100
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
T 0.700 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422 2018
dbSNP: rs7195605
rs7195605
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0596887
Disease:
mathematical ability
T 0.700 GeneticVariation GWASCAT Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. 30038396 2018
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0428472
Disease:
Serum HDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C4528257
Disease:
Corpuscular Hemoglobin Concentration Mean
0.700 GeneticVariation GWASDB Seventy-five genetic loci influencing the human red blood cell. 23222517 2012
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0428472
Disease:
Serum HDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs3785098
rs3785098
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C4528257
Disease:
Corpuscular Hemoglobin Concentration Mean
0.700 GeneticVariation GWASDB Seventy-five genetic loci influencing the human red blood cell. 23222517 2012
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Compound heterozygosity (G71R/R140H) in the lecithin:cholesterol acyltransferase (LCAT) gene results in an intermediate phenotype between LCAT-deficiency and fish-eye disease. 16216249 2006
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Familial lecithin-cholesterol acyltransferase deficiency: biochemical characteristics and molecular analysis of a new LCAT mutation in a Polish family. 16051254 2006
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT The molecular basis of lecithin:cholesterol acyltransferase deficiency syndromes: a comprehensive study of molecular and biochemical findings in 13 unrelated Italian families. 15994445 2005
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT A novel LCAT mutation (Phe382-->Val) in a kindred with familial LCAT deficiency and defective apolipoprotein B-100. 12957688 2003
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Hypocomplementemic type II membranoproliferative glomerulonephritis in a male patient with familial lecithin-cholesterol acyltransferase deficiency due to two different allelic mutations. 11423760 2001
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Transmission of two novel mutations in a pedigree with familial lecithin:cholesterol acyltransferase deficiency: structure-function relationships and studies in a compound heterozygous proband. 9741700 1998
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Complete deficiency of plasma lecithin-cholesterol acyltransferase (LCAT) activity due to a novel homozygous mutation (Gly-30-Ser) in the LCAT gene. 8807342 1996
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT A novel missense mutation (Asn5-->Ile) in lecithin: cholesterol acyltransferase (LCAT) gene in a Japanese patient with LCAT deficiency. 9007616 1996
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Deficiency of lecithin:cholesterol acyltransferase due to compound heterozygosity of two novel mutations (Gly33Arg and 30 bp ins) in the LCAT gene. 7711728 1995
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT A single G to A nucleotide transition in exon IV of the lecithin: cholesterol acyltransferase (LCAT) gene results in an Arg140 to His substitution and causes LCAT-deficiency. 7607641 1995
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Genetic and phenotypic heterogeneity in familial lecithin: cholesterol acyltransferase (LCAT) deficiency. Six newly identified defective alleles further contribute to the structural heterogeneity in this disease. 8432868 1993
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Lecithin:cholesterol acyltransferase deficiency: identification of a causative gene mutation and a co-inherited protein polymorphism. 8318557 1993
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Lecithin-cholesterol acyltransferase (LCAT) deficiency with a missense mutation in exon 6 of the LCAT gene. 1859405 1991