SLC12A4, solute carrier family 12 member 4, 6560

N. diseases: 23; N. variants: 12
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
T 0.800 GeneticVariation GWASCAT Association analyses of East Asian individuals and trans-ancestry analyses with European individuals reveal new loci associated with cholesterol and triglyceride levels. 28334899 2017
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
T 0.800 GeneticVariation GWASCAT Association analyses of East Asian individuals and trans-ancestry analyses with European individuals reveal new loci associated with cholesterol and triglyceride levels. 28334899 2017
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
0.800 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
0.800 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT High prevalence of mutations in LCAT in patients with low HDL cholesterol levels in The Netherlands: identification and characterization of eight novel mutations. 21901787 2011
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT The molecular basis of lecithin:cholesterol acyltransferase deficiency syndromes: a comprehensive study of molecular and biochemical findings in 13 unrelated Italian families. 15994445 2005
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT Molecular basis of fish-eye disease in a patient from Spain. Characterization of a novel mutation in the LCAT gene and lipid analysis of the cornea. 9261271 1997
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT Two novel molecular defects in the LCAT gene are associated with fish eye disease. 8620346 1996
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT The genetic defect of the original Norwegian lecithin:cholesterol acyltransferase deficiency families. 1516702 1992
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT Two different allelic mutations in the lecithin-cholesterol acyltransferase gene associated with the fish eye syndrome. Lecithin-cholesterol acyltransferase (Thr123----Ile) and lecithin-cholesterol acyltransferase (Thr347----Met). 1737840 1992
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
0.800 GeneticVariation UNIPROT An amino acid exchange in exon I of the human lecithin: cholesterol acyltransferase (LCAT) gene is associated with fish eye disease. 1571050 1992
dbSNP: rs121908051
rs121908051
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0342895
Disease:
Fish-Eye Disease
A 0.800 CausalMutation CLINVAR
dbSNP: rs3785100
rs3785100
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0392885
Disease:
High density lipoprotein measurement
T 0.700 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422 2018
dbSNP: rs7195605
rs7195605
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0596887
Disease:
mathematical ability
T 0.700 GeneticVariation GWASCAT Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. 30038396 2018
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0428472
Disease:
Serum HDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs1109166
rs1109166
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C4528257
Disease:
Corpuscular Hemoglobin Concentration Mean
0.700 GeneticVariation GWASDB Seventy-five genetic loci influencing the human red blood cell. 23222517 2012
dbSNP: rs2292318
rs2292318
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C0428472
Disease:
Serum HDL cholesterol measurement
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci. 23063622 2012
dbSNP: rs3785098
rs3785098
Entrez Id: 6560
Gene Symbol: SLC12A4
SLC12A4
CUI: C4528257
Disease:
Corpuscular Hemoglobin Concentration Mean
0.700 GeneticVariation GWASDB Seventy-five genetic loci influencing the human red blood cell. 23222517 2012
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Compound heterozygosity (G71R/R140H) in the lecithin:cholesterol acyltransferase (LCAT) gene results in an intermediate phenotype between LCAT-deficiency and fish-eye disease. 16216249 2006
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Familial lecithin-cholesterol acyltransferase deficiency: biochemical characteristics and molecular analysis of a new LCAT mutation in a Polish family. 16051254 2006
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT The molecular basis of lecithin:cholesterol acyltransferase deficiency syndromes: a comprehensive study of molecular and biochemical findings in 13 unrelated Italian families. 15994445 2005
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT A novel LCAT mutation (Phe382-->Val) in a kindred with familial LCAT deficiency and defective apolipoprotein B-100. 12957688 2003
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Hypocomplementemic type II membranoproliferative glomerulonephritis in a male patient with familial lecithin-cholesterol acyltransferase deficiency due to two different allelic mutations. 11423760 2001
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Transmission of two novel mutations in a pedigree with familial lecithin:cholesterol acyltransferase deficiency: structure-function relationships and studies in a compound heterozygous proband. 9741700 1998
dbSNP: rs1461145750
rs1461145750
Entrez Id: 3931;6560
Gene Symbol: LCAT;SLC12A4
LCAT;SLC12A4
CUI: C0023195
Disease:
Lecithin Acyltransferase Deficiency
0.700 GeneticVariation UNIPROT Complete deficiency of plasma lecithin-cholesterol acyltransferase (LCAT) activity due to a novel homozygous mutation (Gly-30-Ser) in the LCAT gene. 8807342 1996