SNCA, synuclein alpha, 6622

N. diseases: 449; N. variants: 66
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0233514
Disease:
Abnormal behavior
0.020 GeneticVariation BEFREE Finally, administering the retro-inverso peptide to a Drosophila model expressing mutant A53T α-synuclein in the nervous system, resulted in a significant recovery of the behavioral abnormalities of the treated flies and in a significant reduction in α-synuclein accumulation in the brains of the flies. 21085664 2010
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0233514
Disease:
Abnormal behavior
0.020 GeneticVariation BEFREE In this cross-sectional study, we recruited carriers of the A53T SNCA mutation from specialist Movement Disorders clinics in Athens, Greece, and Salerno, Italy, and a cohort of healthy controls with no personal or family history of neurological or psychiatric disorders from London, UK (recruited via public advertisement) who were age matched to the A53T SNCA carriers. 31229470 2019
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0032580
Disease:
Adenomatous Polyposis Coli
0.010 GeneticVariation BEFREE Other examples are, Parkinson's disease (PD), where A53T alpha-synuclein occurs in Lewy bodies and familial amyloid polyneuropathy (FAP), where an A25T substitution appears in transthyretin (TTR). 20060816 2010
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0278878
Disease:
Adult Glioblastoma
0.010 GeneticVariation BEFREE DOPAL (exogenous or endogenous from co-incubation with PC12 cells) and AS (native or A53T mutant form) were added to the incubation medium of glial cells (glioblastoma or MO3.13 oligodendrocytes). 26777075 2016
dbSNP: rs356200
rs356200
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0001956
Disease:
Alcohol Use Disorder
0.010 GeneticVariation BEFREE In humans, we found a significant association of the rs356219 SNP with a high level of anxiety (Beck Anxiety Inventory score >15) and the rs356200 SNP with a positive familial history of AUD. 30120834 2018
dbSNP: rs356219
rs356219
Entrez Id: 6622;105377329
Gene Symbol: SNCA;LOC105377329
SNCA;LOC105377329
CUI: C0001956
Disease:
Alcohol Use Disorder
0.010 GeneticVariation BEFREE In humans, we found a significant association of the rs356219 SNP with a high level of anxiety (Beck Anxiety Inventory score >15) and the rs356200 SNP with a positive familial history of AUD. 30120834 2018
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE Exploration of the possibility that the same mutation of the alpha-synuclein gene as that in familial PD (Ala53Thr) may also confer susceptibility to sporadic PD, DLB, and AD revealed the mutation in none of the samples of 329 cases and 230 controls examined, suggesting that this mutation is not involved in these neurological diseases. 9743579 1998
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE One of the mutant forms of alpha-synuclein (A53T) fibrillizes more rapidly in vitro than does the wild-type protein, suggesting that a correlation may exist between the rate of in vitro fibrillization and/or oligomerization and the progression of PD, analogous to the relationship between Abeta fibrillization in vitro and familial AD. 10704204 2000
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE Analogous to a successful strategy for the production of transgenic animal models for Alzheimer's disease we generated mice expressing wildtype and the A53T mutant of human alphaSN in the nervous system under control of mouse Thy1 regulatory sequences. 11113617 2000
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.040 GeneticVariation BEFREE Cerebral inoculation of human A53T α-synuclein reduces spatial memory decline and amyloid-β aggregation in APP/PS1 transgenic mice of Alzheimer's disease. 30366065 2018
dbSNP: rs356182
rs356182
Entrez Id: 6622;105377329
Gene Symbol: SNCA;LOC105377329
SNCA;LOC105377329
CUI: C0002395
Disease:
Alzheimer's Disease
0.020 GeneticVariation BEFREE In MR between α-synuclein in PD with AD risk, we only extracted rs356182 as the IV through a strict screening process. 30598082 2018
dbSNP: rs356182
rs356182
Entrez Id: 6622;105377329
Gene Symbol: SNCA;LOC105377329
SNCA;LOC105377329
CUI: C0002395
Disease:
Alzheimer's Disease
0.020 GeneticVariation BEFREE Here, in order to discover potential AD-related loci, we investigated the association between late-onset AD (LOAD) susceptibility and nine single-nucleotide polymorphisms (SNPs) (rs11724635 of BST1, rs12637471 of MCCC1, rs15553999 of TMEM229, rs17649553 of MAPT, rs34311866 of TMEM175-GAK-DGKQ, rs356182 of SNCA, rs6430538 of ACMSD-TMEM163, rs76904798 of LRRK2 and rs823118 of RAB7L1-NUCKS1) which were reported to have genome-wide significant associations with PD risk in a recent Genome Wide Association Study performed among white population. 26738859 2017
dbSNP: rs10516846
rs10516846
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE SNCA gene polymorphism may be associated with an increased risk of AD and GG genotype of rs10516846 and elevated SNCA level in CSF may increase the risk of early-onset AD. 27184464 2016
dbSNP: rs356165
rs356165
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE SNCA rs356165 and the MAPT H1 specific SNP rs242557 did not associate with AD or LB pathology. 22291217 2012
dbSNP: rs356219
rs356219
Entrez Id: 6622;105377329
Gene Symbol: SNCA;LOC105377329
SNCA;LOC105377329
CUI: C0002395
Disease:
Alzheimer's Disease
0.010 GeneticVariation BEFREE Assessments included the RBD screening questionnaire, the extended Consortium to Establish a Registry for Alzheimer's Disease test battery, and genetic testing for the risk variant rs356219 in the alpha-synuclein gene. 30048891 2018
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0206245
Disease:
Amyloid Neuropathies, Familial
0.010 GeneticVariation BEFREE Other examples are, Parkinson's disease (PD), where A53T alpha-synuclein occurs in Lewy bodies and familial amyloid polyneuropathy (FAP), where an A25T substitution appears in transthyretin (TTR). 20060816 2010
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C2751492
Disease:
AMYLOIDOSIS, HEREDITARY, TRANSTHYRETIN-RELATED
0.010 GeneticVariation BEFREE Other examples are, Parkinson's disease (PD), where A53T alpha-synuclein occurs in Lewy bodies and familial amyloid polyneuropathy (FAP), where an A25T substitution appears in transthyretin (TTR). 20060816 2010
dbSNP: rs2736990
rs2736990
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE SNCA variants rs2736990 and rs356220 as risk factors for Parkinson's disease but not for amyotrophic lateral sclerosis and multiple system atrophy in a Chinese population. 25129240 2014
dbSNP: rs356220
rs356220
Entrez Id: 6622;105377329
Gene Symbol: SNCA;LOC105377329
SNCA;LOC105377329
CUI: C0002736
Disease:
Amyotrophic Lateral Sclerosis
0.010 GeneticVariation BEFREE SNCA variants rs2736990 and rs356220 as risk factors for Parkinson's disease but not for amyotrophic lateral sclerosis and multiple system atrophy in a Chinese population. 25129240 2014
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C4551993
Disease:
Amyotrophic Lateral Sclerosis, Familial
0.010 GeneticVariation BEFREE These models express G37R mutant Cu/Zn superoxide dismutase (SOD1G37R; fALS), A53T mutant alpha-synuclein (alpha-SynA53T; PD), full-length mutant atrophin-1-65Q, and htt-N171-82Q (huntingtin N-terminal fragment; HD). 17316906 2008
dbSNP: rs1342686707
rs1342686707
Entrez Id: 6622;644248
Gene Symbol: SNCA;SNCA-AS1
SNCA;SNCA-AS1
CUI: C4551993
Disease:
Amyotrophic Lateral Sclerosis, Familial
0.010 GeneticVariation BEFREE These models express G37R mutant Cu/Zn superoxide dismutase (SOD1G37R; fALS), A53T mutant alpha-synuclein (alpha-SynA53T; PD), full-length mutant atrophin-1-65Q, and htt-N171-82Q (huntingtin N-terminal fragment; HD). 17316906 2008
dbSNP: rs10005233
rs10005233
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0003467
Disease:
Anxiety
C 0.700 GeneticVariation GWASCAT Meta-analysis of genome-wide association studies for neuroticism in 449,484 individuals identifies novel genetic loci and pathways. 29942085 2018
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0003467
Disease:
Anxiety
0.030 GeneticVariation BEFREE However, our results indicated that the novel environment-induced defecation response, a common method used to evaluate colorectal function, was not a useful test to measure exacerbation of GI dysfunction, most likely because of the reported reduced level of anxiety in A53T mice. 31709672 2020
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0003467
Disease:
Anxiety
0.030 GeneticVariation BEFREE To test this, we used 3-, 5-, and 7-month-old A53T mice to examine anxiety-like behavior, locomotion, and expression of inflammation and astrogliosis markers in the Hipp and mCtx. 31417337 2019
dbSNP: rs104893877
rs104893877
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
CUI: C0003467
Disease:
Anxiety
0.030 GeneticVariation BEFREE A53T (SNCA) and wild type (WT) littermate mice were evaluated for motor function (rotarod and stride length) and anxiety (elevated plus maze and open field) every 2 weeks. 23938351 2013