TPMT, thiopurine S-methyltransferase, 7172

N. diseases: 83; N. variants: 5
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs79050301
rs79050301
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
C 0.700 GeneticVariation GWASCAT NT5C2 germline variants alter thiopurine metabolism and are associated with acquired NT5C2 relapse mutations in childhood acute lymphoblastic leukaemia. 30201983 2018
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C1961102
Disease:
Precursor Cell Lymphoblastic Leukemia Lymphoma
0.700 GeneticVariation GWASCAT Genomewide Approach Validates Thiopurine Methyltransferase Activity Is a Monogenic Pharmacogenomic Trait. 27564568 2017
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.030 GeneticVariation BEFREE The frequencies of TPMT*2, TPMT A719G, NQO1*2 and CYP1A1*2 variants were examined in 100 patients with ALL and 106 healthy controls by allele specific PCR and/or PCR-RFLP methods using blood samples. 23065291 2013
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.030 GeneticVariation BEFREE The frequencies of TPMT*2, TPMT A719G, NQO1*2 and CYP1A1*2 variants were examined in 100 patients with ALL and 106 healthy controls by allele specific PCR and/or PCR-RFLP methods using blood samples. 23065291 2013
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.030 GeneticVariation BEFREE The frequencies of TPMT*2, TPMT A719G, NQO1*2 and CYP1A1*2 variants were examined in 100 patients with ALL and 106 healthy controls by allele specific PCR and/or PCR-RFLP methods using blood samples. 23065291 2013
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.030 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.030 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.030 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.030 GeneticVariation BEFREE Sixteen single nucleotide polymorphisms (SNPs) (CYP3A4*1B A>G, CYP3A5*3 G>A, GSTP1 313 A>G, GSTM1 deletion, GSTT1 deletion, MDR1 exon 21 G>T/A, MDR1 exon 26 C>T, MTHFR 677 C>T, MTHFR 1298 A>C, NR3C1 1088 A>G, RFC 80 G>A, TPMT 238 G>C, TPMT 460 G>A, TPMT 719 A>G, VDR intron 8 G>A, VDR FokI T>C) that have been implicated in the pharmacogenetics of ALL therapy were analyzed by TotalPlex amplification and SNP genotyping. 18385010 2008
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.030 GeneticVariation BEFREE Sixteen single nucleotide polymorphisms (SNPs) (CYP3A4*1B A>G, CYP3A5*3 G>A, GSTP1 313 A>G, GSTM1 deletion, GSTT1 deletion, MDR1 exon 21 G>T/A, MDR1 exon 26 C>T, MTHFR 677 C>T, MTHFR 1298 A>C, NR3C1 1088 A>G, RFC 80 G>A, TPMT 238 G>C, TPMT 460 G>A, TPMT 719 A>G, VDR intron 8 G>A, VDR FokI T>C) that have been implicated in the pharmacogenetics of ALL therapy were analyzed by TotalPlex amplification and SNP genotyping. 18385010 2008
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.030 GeneticVariation BEFREE Sixteen single nucleotide polymorphisms (SNPs) (CYP3A4*1B A>G, CYP3A5*3 G>A, GSTP1 313 A>G, GSTM1 deletion, GSTT1 deletion, MDR1 exon 21 G>T/A, MDR1 exon 26 C>T, MTHFR 677 C>T, MTHFR 1298 A>C, NR3C1 1088 A>G, RFC 80 G>A, TPMT 238 G>C, TPMT 460 G>A, TPMT 719 A>G, VDR intron 8 G>A, VDR FokI T>C) that have been implicated in the pharmacogenetics of ALL therapy were analyzed by TotalPlex amplification and SNP genotyping. 18385010 2008
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023530
Disease:
Leukopenia
0.020 GeneticVariation BEFREE The presence of the G460A mutation is associated with the development of leukopenia. 28857898 2017
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0342801
Disease:
Thiopurine S methyltranferase deficiency
0.020 GeneticVariation BEFREE Three main TPMT alleles: TPMT*2 (c.238G>C), TPMT*3A (c.460G>A, c.719A>G) and TPMT*3C (c.719A>G) account for 80-95 % of inherited TPMT deficiency in different populations in the world. 27307154 2016
dbSNP: rs1800462
rs1800462
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0342801
Disease:
Thiopurine S methyltranferase deficiency
0.020 GeneticVariation BEFREE Three main TPMT alleles: TPMT*2 (c.238G>C), TPMT*3A (c.460G>A, c.719A>G) and TPMT*3C (c.719A>G) account for 80-95 % of inherited TPMT deficiency in different populations in the world. 27307154 2016
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.020 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.020 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.020 GeneticVariation BEFREE Five (8.6%) of 58 children with ALL had a polymorphic TPMT allele: 4 (3.4%) were heterozygous for TPMT*3A (G460A and A719G), and one (0.9%) was heterozygous for TPMT*3C (A719G). 21400026 2011
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0751606
Disease:
Adult Acute Lymphocytic Leukemia
0.020 GeneticVariation BEFREE A patient, exhibiting neutropenia on 6-MP was observed to be G460A-homozygote, while, two Acute Lymphoblastic Leukemia (ALL) patients with side-effects exhibited wild-type alleles. 20037211 2009
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023449
Disease:
Acute lymphocytic leukemia
0.020 GeneticVariation BEFREE A patient, exhibiting neutropenia on 6-MP was observed to be G460A-homozygote, while, two Acute Lymphoblastic Leukemia (ALL) patients with side-effects exhibited wild-type alleles. 20037211 2009
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.020 GeneticVariation BEFREE A patient, exhibiting neutropenia on 6-MP was observed to be G460A-homozygote, while, two Acute Lymphoblastic Leukemia (ALL) patients with side-effects exhibited wild-type alleles. 20037211 2009
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023530
Disease:
Leukopenia
0.020 GeneticVariation BEFREE ITPA(94C>A, IVS2+21A>C) and TPMT (238G>C, 460G>A, and 719A>G) genotypes were assessed in 262 IBD patients (159 females, 103 males; 67 patients with ulcerative colitis, 195 patients with Crohn's disease) treated with AZA and were correlated with the development of leukopenia and hepatotoxicity. 16431304 2006
dbSNP: rs1142345
rs1142345
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0342801
Disease:
Thiopurine S methyltranferase deficiency
0.020 GeneticVariation BEFREE The mutant alleles TPMT*2 (238G>C), TPMT*3A (460G>A, 719A>G), TPMT*3B (460G>A), and TPMT*3C (719A>G) account for 80-95% of TPMT deficiency observed in Caucasian populations. 14967158 2004
dbSNP: rs1800462
rs1800462
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0342801
Disease:
Thiopurine S methyltranferase deficiency
0.020 GeneticVariation BEFREE The mutant alleles TPMT*2 (238G>C), TPMT*3A (460G>A, 719A>G), TPMT*3B (460G>A), and TPMT*3C (719A>G) account for 80-95% of TPMT deficiency observed in Caucasian populations. 14967158 2004
dbSNP: rs1800460
rs1800460
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0019196
Disease:
Hepatitis C
0.010 GeneticVariation BEFREE There was a significant correlation between the combined presence of HCV and TPMT*3B G460A gene polymorphisms and grades 2-4 hepatotoxicity as aspartate aminotransferase (AST) elevation (P < 0.04). 27163515 2016
dbSNP: rs1800462
rs1800462
Entrez Id: 7172
Gene Symbol: TPMT
TPMT
CUI: C0023452
Disease:
Childhood Acute Lymphoblastic Leukemia
0.010 GeneticVariation BEFREE In this work, we conduct a case-control study to assess the impact of CYP1A1*2A (CYP1A1 T6235C); NQO1*2 (NQO1 C609T); TPMT*2 (TPMT G238C) and TPMT A719G polymorphisms on the risk of developing ALL. 23065291 2013