Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1555910048
rs1555910048
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0025362
Disease:
Mental Retardation
TGGCCGTGGGCAGCCCC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910143
rs1555910143
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
C 0.700 GeneticVariation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0026884
Disease:
Mutism
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C2237142
Disease:
Moderate global developmental delay
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0033975
Disease:
Psychotic Disorders
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910162
rs1555910162
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C3151380
Disease:
SCHIZOPHRENIA 15
GC 0.700 CausalMutation CLINVAR
dbSNP: rs1555910212
rs1555910212
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs1569097392
rs1569097392
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0557874
Disease:
Global developmental delay
T 0.700 GeneticVariation CLINVAR
dbSNP: rs1569097392
rs1569097392
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0036572
Disease:
Seizures
T 0.700 GeneticVariation CLINVAR
dbSNP: rs1569115756
rs1569115756
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs387906932
rs387906932
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C3151380
Disease:
SCHIZOPHRENIA 15
T 0.700 CausalMutation CLINVAR
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
T 0.700 CausalMutation CLINVAR
dbSNP: rs762292772
rs762292772
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease:
22q13.3 Deletion Syndrome
TG 0.700 CausalMutation CLINVAR
dbSNP: rs6010065
rs6010065
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Genotyping in a clinical cohort within one of these promoters (<i>SHANK3</i> promoter 6) revealed that the SNP rs6010065 was associated with ASD. 29339533 2018
dbSNP: rs767058690
rs767058690
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE The latter variant was found in one additional SCZ individual and the p.G1011V variant was identified in two additional SCZ individuals from cohort C2. 28371232 2017
dbSNP: rs767058690
rs767058690
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE The p.G1011V variant was the most interesting variant in our study; together with previous studies this variant has been identified in 4 out of 1,524 SCZ patients and in 4 out of 2,147 individuals with autism spectrum disorder (ASD), but not in 2468 European Sanger-sequenced controls. 28371232 2017
dbSNP: rs9616915
rs9616915
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C0524528
Disease:
Pervasive Development Disorder
0.010 GeneticVariation BEFREE A commonly carried genetic variant, rs9616915, in SHANK3 gene is associated with a reduced risk of autism spectrum disorder: replication in a Chinese population. 24398551 2014
dbSNP: rs9616915
rs9616915
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Genetic analysis of heterozygous model, dominant model and additive model showed an association of the C allele of the rs9616915 with ASD (e.g., additive model, OR 0.582, 95% CI 0.359-0.942, P = 0.028). 24398551 2014
dbSNP: rs76224556
rs76224556
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE While SHANK3 variants are present in any ASD subtype, the SNP rs76224556 appears to be significantly associated with PDD-NOS cases. 22892527 2013
dbSNP: rs1336089966
rs1336089966
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Here, we report the functional effects of two de novo mutations (STOP and Q321R) and two inherited variations (R12C and R300C) identified in patients with ASD. 21606927 2012
dbSNP: rs376862893
rs376862893
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1510586
Disease:
Autism Spectrum Disorders
0.010 GeneticVariation BEFREE Here, we report the functional effects of two de novo mutations (STOP and Q321R) and two inherited variations (R12C and R300C) identified in patients with ASD. 21606927 2012