rs10889677, IL23R

N. diseases: 40
Source: ALL
Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE A subgroup analysis showed that the genetic models of rs10889677 polymorphism were associated with CD risk in Caucasians (p < 0.05), but not in Asians (p > 0.05). 31728561 2020
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE Rs1884444 was found to confer risk for UC and psoriasis, rs10889677 for CD and psoriasis, while rs2201841 and rs7517847 had effect only in CD. 23093364 2013
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE Using regression analysis models the rs1004819, rs2201841, and rs10889677 SNPs were found to confer risk for Crohn's disease and ankylosing spondylitis, while rs1343151 had a protective effect in both of these diseases, and the rs2201841 and rs10889677 SNPs showed susceptibility nature for rheumatoid arthritis. 23054009 2013
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE Multivariate analysis showed independent CD association for carriers of ATG16L1 (odds ratio [OR] = 1.8, 95% confidence interval [CI] 1.09-3.24), IBD5-IGR2230 (OR = 2.16, 95% CI 1.30-3.59), and IL23R-rs10889677 (OR = 2.13, 95% CI 1.39-3.28) while retaining association for NOD2 mutation carriers (OR = 4.45, 95% CI 2.68-7.38), IBD family history (OR = 2.75, 95% CI 1.42-5.31), tobacco (OR = 2.06, 95% CI 1.35-3.14), and Jewish ethnicity (OR = 20.1, 95% CI 2.16-186.8). 18521914 2008
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE We observed an increased prevalence of the homozygous rs10889677 AA and homozygous rs2201841 CC genotypes both in the Crohn's disease and in the RA groups as compared to the controls (12.1%, 11.9% vs 5.91%, p<0.05; and 13.2%, 13.1% vs 5.91%, p<0.05), but not in the SSc patients. 17606463 2008
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASCAT Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789 2007
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASDB Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci. 17804789 2007
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASDB A genome-wide association study identifies IL23R as an inflammatory bowel disease gene. 17068223 2006
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.820 GeneticVariation BEFREE In addition, the allelic (CD: p < 0.00001, OR = 1.34; UC: p < 0.00001, OR = 1.22) and dominant models (CD: p = 0.002, OR = 1.39; UC: p = 0.01, OR = 1.29), but not the recessive model of rs10889677 polymorphism significantly increase the risk of CD and UC (p > 0.05). 31728561 2020
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.820 GeneticVariation BEFREE Stratification by ethnicity revealed that the rs11209026, rs7517847, rs10889677, rs2201841 andrs11465804 polymorphisms were associated with UC in the Caucasian group, but not in Asians, while the rs1004819 and rs11209032 polymorphisms were found to be related to UC for both Caucasian and Asian groups. 27902482 2017
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.820 GeneticVariation GWASDB Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. 19122664 2009
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.820 GeneticVariation GWASCAT Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. 19122664 2009
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.050 GeneticVariation BEFREE Lack of association between rheumatoid arthritis and genetic variants rs10889677, rs11209026 and rs2201841 of IL-23R gene. 29370888 2018
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.050 GeneticVariation BEFREE Knowing this, the aim of this study was to investigate the association of +2199 A/C IL-23R (rs10889677), -197 G/A IL-17A (rs2275913), and +7488 A/G IL-17F (rs763780) gene polymorphisms with RA susceptibility and clinical features in a Brazilian population. 28547498 2017
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.050 GeneticVariation BEFREE Our data emphasise that the AA genotype of rs11209026 (Arg381Gln) was significantly associated with RA patients compared to the controls (P value=0.001).We did not find any significant association between either rs2201841 or rs10889677 and the development of rheumatoid arthritis (P value=1.000 & 0.562 respectively). 25858864 2015
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.050 GeneticVariation BEFREE Using regression analysis models the rs1004819, rs2201841, and rs10889677 SNPs were found to confer risk for Crohn's disease and ankylosing spondylitis, while rs1343151 had a protective effect in both of these diseases, and the rs2201841 and rs10889677 SNPs showed susceptibility nature for rheumatoid arthritis. 23054009 2013
Rheumatoid Arthritis
CUI: C0003873
Disease: Rheumatoid Arthritis
0.050 GeneticVariation BEFREE Logistic regression analysis revealed that bearing these alleles represent risk for the development of rheumatoid arthritis (chi(2) = 5.58, p = 0.018, OR = 2.15, 95% CI 1.14-4.06 for rs10889677; and chi(2) = 7.45, p = 0.006, OR = 2.40, 95% CI 1.28-4.51 for rs2201841). 17606463 2008
Malignant neoplasm of stomach
CUI: C0024623
Disease: Malignant neoplasm of stomach
0.030 GeneticVariation BEFREE The <i>let-7</i>-related polymorphism rs3811463 in <i>LIN28A</i> is associated with the susceptibility to gastric cancer and the <i>let-7</i>-related polymorphism rs10889677 in <i>IL23R</i> is associated with the prognosis of gastric cancer. 30833806 2019
Stomach Carcinoma
CUI: C0699791
Disease: Stomach Carcinoma
0.030 GeneticVariation BEFREE The <i>let-7</i>-related polymorphism rs3811463 in <i>LIN28A</i> is associated with the susceptibility to gastric cancer and the <i>let-7</i>-related polymorphism rs10889677 in <i>IL23R</i> is associated with the prognosis of gastric cancer. 30833806 2019
Ankylosing spondylitis
CUI: C0038013
Disease: Ankylosing spondylitis
0.030 GeneticVariation BEFREE This meta-analysis demonstrates that IL23R gene rs10889677 A allele confers increased risk of AS in Europeans, but its role in Asian populations needs further exploration. 29198991 2018
Malignant neoplasm of stomach
CUI: C0024623
Disease: Malignant neoplasm of stomach
0.030 GeneticVariation BEFREE We found that CT (OR<sub>adj</sub> = 0.59; 95% CI: 0.44-0.79), CT + TT (OR<sub>adj</sub> = 0.58; 95% CI: 0.43-0.77) genotypes, and T allele (OR<sub>adj</sub> = 0.77; 95% CI: 0.47-0.80) of rs3748067 reduced GC risk; the rs10889677 CC genotype (OR<sub>adj</sub> = 2.22; 95% CI: 1.27-3.87) and C allele (OR<sub>adj</sub> = 1.24; 95% CI: 1.02-1.52) increased GC risk. 29118466 2017
Stomach Carcinoma
CUI: C0699791
Disease: Stomach Carcinoma
0.030 GeneticVariation BEFREE We found that CT (OR<sub>adj</sub> = 0.59; 95% CI: 0.44-0.79), CT + TT (OR<sub>adj</sub> = 0.58; 95% CI: 0.43-0.77) genotypes, and T allele (OR<sub>adj</sub> = 0.77; 95% CI: 0.47-0.80) of rs3748067 reduced GC risk; the rs10889677 CC genotype (OR<sub>adj</sub> = 2.22; 95% CI: 1.27-3.87) and C allele (OR<sub>adj</sub> = 1.24; 95% CI: 1.02-1.52) increased GC risk. 29118466 2017
Malignant neoplasm of breast
CUI: C0006142
Disease: Malignant neoplasm of breast
0.030 GeneticVariation BEFREE However, rs10889677 may be associated with BC susceptibility and rs1884444 had association with HCC risk. 26717375 2015
Malignant Neoplasms
CUI: C0006826
Disease: Malignant Neoplasms
0.030 GeneticVariation BEFREE However, no evidence of a relationship between IL-23R polymorphisms (rs6682925, rs10889677, rs1884444) and cancer risk was found in the overall population.Our meta-analysis provides no evidence supporting a global association of IL-23R polymorphisms (rs6682925, rs10889677, rs1884444) with the risk of cancer. 26717375 2015
Breast Carcinoma
CUI: C0678222
Disease: Breast Carcinoma
0.030 GeneticVariation BEFREE However, rs10889677 may be associated with BC susceptibility and rs1884444 had association with HCC risk. 26717375 2015