rs13361189, None

N. diseases: 13
Source: ALL
Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE Our study confirms IRGM rs13361189 and rs4958847 polymorphisms to be important for Crohn's disease susceptibility and phenotype modulation, in accordance with previous findings. 26066377 2015
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE Our meta-analysis results indicate that the IRGM rs13361189 polymorphism contributes to the susceptibility to CD. 25526194 2014
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE The analysis showed modest significant association for the rs13361189, rs4958847 and rs10065172 variants in Crohn's disease (CD): the risk estimates for the allele contrast were OR=1.306 (1.200-1.420), p=5.2 × 10(-10), OR=1.182 (1.082-1.290), p=0.0002, and OR=1.248 (1.057-1.473), p=0.009 respectively (still significant when the p value was Bonferroni adjusted to 0.017). 24232856 2013
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE In addition, our meta-analysis data showed that IRGM rs13361189 and rs4958847 polymorphisms were associated with CD (rs13361189 C allele P=1.07 x 10(-19), pooled OR=1.34; rs4958847 A allele P=2.78 x 10(-17), pooled OR=1.31) and UC (rs13361189 P=0.0069, pooled OR=1.16; rs4958847 P=0.014, pooled OR=1.13). 19491842 2009
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation BEFREE NCF4 and IRGM were significantly associated with ileal CD (P-value(rs4821544)=0.0090, odds ratio (OR)=1.425, 95% confidence interval (CI): 1.092-1.859; P-value(rs13361189)=0.0017, OR=1.942, 95% CI: 1.274-2.959; P-value(rs4958847)=0.0022, OR=1.767, 95% CI: 1.224-2.558), but not with other forms of inflammatory bowel disease (IBD). 18580884 2008
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASDB Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease. 18587394 2008
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASCAT Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261 2007
Crohn Disease
CUI: C0010346
Disease: Crohn Disease
0.850 GeneticVariation GWASDB Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility. 17554261 2007
Non-alcoholic Fatty Liver Disease
CUI: C0400966
Disease: Non-alcoholic Fatty Liver Disease
0.020 GeneticVariation BEFREE We examined the relationship between IRGM rs13361189 variants and NAFLD in a community-based cohort of adults. 30597691 2019
Non-alcoholic Fatty Liver Disease
CUI: C0400966
Disease: Non-alcoholic Fatty Liver Disease
0.020 GeneticVariation BEFREE The relationship between VAT and NAFLD was modified by IRGM variants rs4958847 and rs13361189 (Pinteraction = 0.005 and Pinteraction < 0.001, respectively). 29788077 2018
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.020 GeneticVariation BEFREE Conversely, there was no association of rs13361189 or rs4958847 variant with risk of ulcerative colitis (UC). 24232856 2013
Ulcerative Colitis
CUI: C0009324
Disease: Ulcerative Colitis
0.020 GeneticVariation BEFREE In addition, our meta-analysis data showed that IRGM rs13361189 and rs4958847 polymorphisms were associated with CD (rs13361189 C allele P=1.07 x 10(-19), pooled OR=1.34; rs4958847 A allele P=2.78 x 10(-17), pooled OR=1.31) and UC (rs13361189 P=0.0069, pooled OR=1.16; rs4958847 P=0.014, pooled OR=1.13). 19491842 2009
Steatohepatitis
CUI: C2711227
Disease: Steatohepatitis
0.010 GeneticVariation BEFREE In our community-based, longitudinal cohort of Caucasian adults, variants in the autophagy-governing IRGM gene at the rs13361189 locus were not associated with increased prevalent or incident HS. 30597691 2019
Fatty Liver
CUI: C0015695
Disease: Fatty Liver
0.010 GeneticVariation BEFREE In our community-based, longitudinal cohort of Caucasian adults, variants in the autophagy-governing IRGM gene at the rs13361189 locus were not associated with increased prevalent or incident HS. 30597691 2019
Graves Disease
CUI: C0018213
Disease: Graves Disease
0.010 GeneticVariation BEFREE T allele of rs10065172, A allele of rs4958847, and C allele of rs13361189 were all higher in Graves' disease patients than controls, and the ORs were OR = 1.207 (<i>P</i> = 0.022), OR = 1.207 (<i>P</i> = 0.027), and OR = 1.200 (<i>P</i> = 0.027), respectively. 29992164 2018
Tuberculosis
CUI: C0041296
Disease: Tuberculosis
0.010 GeneticVariation BEFREE Interferon-gamma release levels were tested by T-SPOT. rs10065172 (P = 0.024, OR 0.67 (95% CI 0.48-0.95)), rs10051924 (P = 0.01, OR 0.64 (95% CI 0.46-0.90)), and rs13361189 (P = 0.055, OR 0.72 (95% CI 0.51-1.01)) were associated with a protective role against latent TB progression. 26980495 2016
Ileal Diseases
CUI: C0020875
Disease: Ileal Diseases
0.010 GeneticVariation BEFREE The SNP rs13361189 was also found to increase the risk of Crohn's disease clinical sub-phenotype (fibrostricturing behaviour, ileal disease, perianal disease, intestinal resection). 26066377 2015
Intestinal Diseases
CUI: C0021831
Disease: Intestinal Diseases
0.010 GeneticVariation BEFREE The SNP rs13361189 was also found to increase the risk of Crohn's disease clinical sub-phenotype (fibrostricturing behaviour, ileal disease, perianal disease, intestinal resection). 26066377 2015
Glioma
CUI: C0017638
Disease: Glioma
0.010 GeneticVariation BEFREE In the current study, we investigated two IRGM genetic polymorphisms, rs10065172C/T and rs13361189T/C, in glioma and their effects on cytokine expression. 24859836 2014
Malignant neoplasm of stomach
CUI: C0024623
Disease: Malignant neoplasm of stomach
0.010 GeneticVariation BEFREE In contrast, the rs13361189 IRGM polymorphism was not associated with susceptibility to gastric cancer. 22713085 2012
Stomach Carcinoma
CUI: C0699791
Disease: Stomach Carcinoma
0.010 GeneticVariation BEFREE In contrast, the rs13361189 IRGM polymorphism was not associated with susceptibility to gastric cancer. 22713085 2012
Inflammatory Bowel Diseases
CUI: C0021390
Disease: Inflammatory Bowel Diseases
0.010 GeneticVariation BEFREE NCF4 and IRGM were significantly associated with ileal CD (P-value(rs4821544)=0.0090, odds ratio (OR)=1.425, 95% confidence interval (CI): 1.092-1.859; P-value(rs13361189)=0.0017, OR=1.942, 95% CI: 1.274-2.959; P-value(rs4958847)=0.0022, OR=1.767, 95% CI: 1.224-2.558), but not with other forms of inflammatory bowel disease (IBD). 18580884 2008