DisGeNET - a database of gene-disease associations

Source: GWASDB

Variants associated to the Gene: SCGN ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2294346	SCGN	0.925	0.120	6	25689259	intron variant	G/C;T	snv	0.46; 8.8E-06		4
rs2205936	SCGN	0.925	0.120	6	25685264	intron variant	G/A;C	snv			4
rs11969981	SCGN	0.925	0.120	6	25650589	upstream gene variant	T/A	snv		0.12	3
rs2294344	SCGN	0.925	0.120	6	25651997	upstream gene variant	C/A	snv		0.12	3
rs11794	SCGN	0.925	0.120	6	25701490	3 prime UTR variant	G/A	snv		0.26	3
rs4409177	SCGN	0.925	0.120	6	25694263	intron variant	T/G	snv		0.25	3
rs4140640	SCGN	0.925	0.120	6	25651422	upstream gene variant	C/G	snv		0.27	3
rs9467570	SCGN	0.925	0.120	6	25699055	intron variant	C/A	snv		0.25	3
rs12528182	SCGN	0.925	0.120	6	25650969	upstream gene variant	C/G;T	snv			3
rs10484591	SCGN	0.925	0.120	6	25656433	intron variant	C/A;G	snv			3
rs4712950	SCGN	0.925	0.120	6	25657362	intron variant	A/G	snv		0.12	3
rs9366627	SCGN	0.925	0.120	6	25686177	intron variant	C/T	snv		0.30	3
rs9379778	SCGN	0.925	0.120	6	25687351	intron variant	T/C	snv		0.28	3
rs17492659	SCGN	0.925	0.120	6	25691134	intron variant	C/T	snv	0.11	0.10	3
rs4711093	SCGN	0.925	0.120	6	25687667	intron variant	T/C	snv		0.28	3
rs4419666	SCGN	0.925	0.120	6	25693046	intron variant	C/T	snv		0.21	3
rs2072846	SCGN	0.925	0.120	6	25654876	intron variant	T/C	snv		0.28	3
rs12524760	SCGN	0.925	0.120	6	25651035	upstream gene variant	A/G	snv		0.27	3
rs9467556	SCGN			6	25663957	intron variant	T/C	snv		0.16	3
rs3922681	SCGN	0.925	0.120	6	25698253	intron variant	C/T	snv		0.26	2
rs1003688	SCGN			6	25658944	intron variant	G/A	snv		0.14	2
rs2328891	SCGN			6	25669441	intron variant	G/A	snv		0.14	2
rs1321248	SCGN			6	25662575	intron variant	T/C	snv		0.16	2
rs1321247	SCGN			6	25662645	intron variant	A/T	snv		6.5E-02	2
rs9348689	SCGN			6	25684425	intron variant	G/A;C;T	snv			2