DisGeNET - a database of gene-disease associations

Source: GWASCAT

Variants associated to the Disease: Ulcerative Colitis ×

Variants associated to the Gene: IL23R ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs11580078	C1orf141 ; IL23R	0.724	0.240	1	67203951	intron variant	C/A;G	snv			14
rs10889676	IL23R	0.827	0.120	1	67256884	intron variant	C/A;T	snv			5
rs11209026	IL23R	0.597	0.680	1	67240275	missense variant	G/A	snv	4.2E-02	4.6E-02	5
rs183686347	IL23R	0.827	0.120	1	67237759	intron variant	G/A	snv		4.8E-03	5
rs80174646	IL23R	0.827	0.120	1	67242472	intron variant	G/T	snv		5.8E-02	5
rs7517847	IL23R ; C1orf141	0.689	0.600	1	67215986	intron variant	T/G	snv		0.37	5
rs11581607	IL23R	0.925	0.040	1	67242007	intron variant	G/A	snv		4.6E-02	4
rs2201841	C1orf141 ; IL23R	0.716	0.440	1	67228519	intron variant	A/G;T	snv			3
rs10889677	IL23R	0.627	0.720	1	67259437	3 prime UTR variant	C/A	snv		0.27	2
rs76418789	IL23R ; C1orf141	0.882	0.080	1	67182913	missense variant	G/A	snv	7.3E-03	4.5E-03	2
rs1004819	C1orf141 ; IL23R	0.776	0.360	1	67204530	intron variant	G/A	snv		0.30	1
rs11805303	C1orf141 ; IL23R	0.827	0.240	1	67209833	intron variant	C/T	snv		0.30	1
rs11465804	IL23R	0.752	0.320	1	67236843	intron variant	T/G	snv	4.4E-02	5.4E-02	1
rs1343151	IL23R	0.752	0.400	1	67253446	intron variant	G/A	snv		0.41	1