Source: BEFREE

Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4804
Gene Symbol: NGFR
NGFR
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 AlteredExpression BEFREE A detailed study of 141 STT was undertaken to determine the frequency of expression of nerve growth factor receptor (NGF-R), its specificity and sensitivity for neural tumors, and the effect of fixation on detection. 2456020

1988

Entrez Id: 5925
Gene Symbol: RB1
RB1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 GeneticVariation BEFREE Structural alterations of the RB1 gene in human soft tissue tumours. 2765366

1989

Entrez Id: 60
Gene Symbol: ACTB
ACTB
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE The present study indicates that both muscle-specific actin and desmin can be expressed in tumors lacking ultrastructural evidence of a rhabdomyoblastic differentiation and that the combined use of monoclonal antibodies to desmin and muscle-specific actin is of value when it comes to recognizing rhabdomyosarcomas within the group of undifferentiated small and dark cell malignancies of soft tissue tumors. 2282206

1990

Entrez Id: 1674
Gene Symbol: DES
DES
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 Biomarker BEFREE The present study indicates that both muscle-specific actin and desmin can be expressed in tumors lacking ultrastructural evidence of a rhabdomyoblastic differentiation and that the combined use of monoclonal antibodies to desmin and muscle-specific actin is of value when it comes to recognizing rhabdomyosarcomas within the group of undifferentiated small and dark cell malignancies of soft tissue tumors. 2282206

1990

Entrez Id: 5925
Gene Symbol: RB1
RB1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE The Rb-1 gene was altered in 40% of high-grade bone and soft-tissue tumors, but not in low-grade bone tumors and in only one low-grade, soft-tissue sarcoma. 1988704

1991

Entrez Id: 129831
Gene Symbol: RBM45
RBM45
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 Biomarker BEFREE The Rb-1 gene was altered in 40% of high-grade bone and soft-tissue tumors, but not in low-grade bone tumors and in only one low-grade, soft-tissue sarcoma. 1988704

1991

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 GeneticVariation BEFREE Malignant schwannomas are soft-tissue neoplasms that occur at increased frequency with germline alterations of the neurofibromatosis-1 (NF1) gene at 17q11.2. 1483704

1992

Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 Biomarker BEFREE This is the first tumor with i(12p) among bone and soft tissue tumors. 1318780

1992

Entrez Id: 3481
Gene Symbol: IGF2
IGF2
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 AlteredExpression BEFREE In situ hybridization indicated that all RMSs showed highly strong and specific IGF-II mRNA expression, whereas other soft tissue tumors showed very low or no signal. 1434543

1992

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.060 Biomarker BEFREE Taken together, p53 abnormalities were found in approximately 65% of the osteosarcomas, malignant fibrous histiocytomas, and leiomyosarcomas examined and in 30% of the other soft tissue tumors. 8425179

1993

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.060 GeneticVariation BEFREE The p53 tumor suppressor gene is a possible candidate underlying the syndrome because (a) mutations in the p53 gene are ubiquitous in human cancer, including colon carcinoma and gliomas, and (b) somatic or germ line mutations of the p53 tumor suppressor gene cause the Li-Fraumeni syndrome, which is characterized by the association of breast and soft tissue tumors. 8439970

1993

Entrez Id: 947
Gene Symbol: CD34
CD34
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE Strong CD34 reactivity was present in each DFSP (n = 19) but was consistently absent from FH (n = 45) and other soft-tissue tumors (n = 47). 7681857

1993

Entrez Id: 4942
Gene Symbol: OAT
OAT
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 Biomarker BEFREE Therefore, we conclude that OAT YAC2 spans the synovial sarcoma-specific translocation breakpoint and, as such, may serve as an ideal starting point from which the gene(s) involved in the development of this soft tissue tumor can be isolated. 7682104

1993

Entrez Id: 4193
Gene Symbol: MDM2
MDM2
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.080 Biomarker BEFREE MDM2 gene amplification correlates with ring chromosome in soft tissue tumors. 7519048

1994

Entrez Id: 60
Gene Symbol: ACTB
ACTB
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE The use of Northern blots for alpha-CARD actin as an adjunct to conventional techniques may be helpful for the precise identification of primary RMSs compared to other soft tissue neoplasms. 8160781

1994

Entrez Id: 4193
Gene Symbol: MDM2
MDM2
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.080 Biomarker BEFREE MDM2 gene amplification in bone and soft-tissue tumors: association with tumor progression in differentiated adipose-tissue tumors. 7591308

1995

Entrez Id: 4193
Gene Symbol: MDM2
MDM2
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.080 Biomarker BEFREE This study indicates that MDM2, or possibly an as-yet-unidentified gene in its proximity, is the target gene of the 12q13-15 amplification in soft tissue tumors. 7656201

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.060 AlteredExpression BEFREE Abnormalities of p53 and p110RB tumor suppressor gene expression in human soft tissue tumors: correlations with cell proliferation and tumor grade. 8552572

1995

Entrez Id: 1019
Gene Symbol: CDK4
CDK4
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.040 Biomarker BEFREE Amplification of the genes MDM2, SAS, and CDK4, all located on the long arm of chromosome 12, has recently been demonstrated in human soft tissue tumors. 7656201

1995

Entrez Id: 6302
Gene Symbol: TSPAN31
TSPAN31
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE Amplification of the genes MDM2, SAS, and CDK4, all located on the long arm of chromosome 12, has recently been demonstrated in human soft tissue tumors. 7656201

1995

Entrez Id: 54187
Gene Symbol: NANS
NANS
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 Biomarker BEFREE Amplification of the genes MDM2, SAS, and CDK4, all located on the long arm of chromosome 12, has recently been demonstrated in human soft tissue tumors. 7656201

1995

Entrez Id: 4763
Gene Symbol: NF1
NF1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 AlteredExpression BEFREE Reduced expression of neurofibromin in the soft tissue tumours obtained from patients with neurofibromatosis type I. 7614817

1995

Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.020 AlteredExpression BEFREE In benign soft-tissue tumors, 1 chemodectoma and 1 neurothekeoma showed low MRP expression; however, no case showed co-expression of MRP and MDR1. 8601564

1996

Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.010 AlteredExpression BEFREE In benign soft-tissue tumors, 1 chemodectoma and 1 neurothekeoma showed low MRP expression; however, no case showed co-expression of MRP and MDR1. 8601564

1996

Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
CUI: C0037579
Disease: Soft Tissue Neoplasms
Soft Tissue Neoplasms
0.100 GeneticVariation BEFREE The potentially diagnostic chromosomal translocations and associated genes identified in STT include Ewing's/PNET t(11;22)(q24;q12)(FLI1;EWS), t(21;22)(q22;q12)(ERG; EWS); t(7;22)(p22;q12)(ETV1;EWS); desmoplastic small round cell tumor t(11;22)(p13;q12)(WT1;EWS); extraskeletal myxoid chondrosarcoma t(9;22)(q22;q12) (TEC(CHN);EWS); malignant ectomesenchymoma t(11;22)(q24;q12)(FLI1;EWS); alveolar rhabdomyosarcoma t(2;13)(q35;q14)(PAX-3;FKHR); t(1;13) (p36;q14)(PAX-7;FKHR); myxoid and round cell liposarcoma t(12;16)(q13;p11)(CHOP;TLS(FUS)); synovial sarcoma t(X;18)(p11;q11)(SSX1&2;SYT), and others. 9344317

1997