Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE One case not meeting criteria for NIFTP maintained the diagnosis of encapsulated FVPTC without invasion but demonstrated significant mitotic activity (three mitoses/ten HPF) and lacked lymph node metastases and BRAF V600E mutation. 29368294

2018

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 Biomarker BEFREE The FVPTC in the left thyroid showed both BRAF and K-RAS negativity. 27873522

2017

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE This study correlates histological features, immunoreactivity for CK19, HBME, and Gal, and BRAF V600E mutation with lymph node (LN) metastasis and follow-up in FVPTC. 25702102

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE BRAF V600E/K601E and RAS mutational analysis was performed on 187 FVPTCs. 25648502

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 AlteredExpression BEFREE Expression profiling in FVPTCs and FAs, all of which were negative for a BRAF mutation, revealed 55 transcripts that were significantly differentially expressed, 40 of which were upregulated and 15 downregulated in FVPTCs vs. FAs. 25923053

2015

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE These data support the hypothesis that FVPTC is composed of distinct biological entities, with one class being identified by BRAF mutation and support the use of clinical genotyping assays that detect a diverse array of rearrangements involving ALK and PPARγ. 25148236

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE The medical records of the 137 patients with >5 mm FVPTCs and known BRAF mutation status in the interested nodule were reviewed. 24548081

2014

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 Biomarker BEFREE RAS mutational analysis is more useful than BRAF testing to improve the triage efficacy of FNAC for FVPTC. 23590130

2013

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE Encapsulated FVPTCs have been reported to have virtually no recurrence risk or metastatic potential and to harbor RAS mutations but not BRAF mutations. 23477374

2013

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 Biomarker BEFREE The BRAF status was evaluated in a total of 187 patients in whom FVPTC was consecutively diagnosed by histology between January 2006 and January 2009. 20950194

2010

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE To investigate the frequency of BRAF mutations and HBME-1 immunopositivity, in a series of FVPTCs in which the diagnosis was established by 100% consensus among a panel of 6 surgical pathologists. 20042852

2010

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE Encapsulated FVPTC have a molecular profile very close to follicular adenomas/carcinomas (high rate of RAS and absence of BRAF mutations). 21088998

2010

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE In FVPTCs, we observed ras mutation in 6 of 24 cases (25%), BRAF mutation in 1 of 13 cases (7.6%), and ret rearrangement in 5 of 12 cases (41.7%). 16784981

2006

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Follicular Variant Thyroid Gland Papillary Carcinoma
0.100 GeneticVariation BEFREE BRAF mutations were only detected in FVPTC (10%); the BRAF mutations in these cases (K601E and G474R) are different from the typical BRAF(V600E) mutation of conventional PTCs. 16219715

2006

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 GeneticVariation BEFREE RET-PTC1 and RET-PTC3 rearrangements were present (11.5%) only in infiltrative FVPTCs. 28940583

2018

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 Biomarker BEFREE In conclusion, EWD-PTC and FVPTC share similar histologic features, but they are different tumors with different molecular biologic and clinical manifestations. 27873522

2017

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 Biomarker BEFREE FVPTC was significantly less likely to be classified sonographically as malignant (U5) (p = 0.006) or suspicious/malignant (U4/5) (p = 0.009) than conventional PTC. 28396943

2017

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 GeneticVariation BEFREE The surgical resection specimen demonstrated FVPTC in 20 (74%) cases, classical type PTC in two (7%), solid variant of PTC in one (4%), and follicular thyroid carcinoma in four (15%). 28114855

2017

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 Biomarker BEFREE FNAC diagnoses of FVPTC included benign (5%), atypia of undetermined significance (19%), follicular neoplasm/suspicious for follicular neoplasm (14%), suspicious for PTC (29%), and PTC (34%). 23590130

2013

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 Biomarker BEFREE In the thyroid, the PAX8-PPARG fusion is present in the neoplastic lesions that have a follicular architecture-follicular thyroid carcinoma (FTC) and follicular variant of papillary thyroid carcinoma (FVPTC), and less frequently in follicular thyroid adenoma (FTA), while the presence of RET/PTC fusions are largely restricted to papillary thyroid carcinoma (PTC). 22961909

2012

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 GeneticVariation BEFREE RET-PTC and PAX8-PPARgamma rearrangements and mutations of the neuroblastoma RAS viral oncogene homolog N-RAS at codon 61 were the most common genetic alterations in FVPTCs. 20564403

2010

Entrez Id: 5979
Gene Symbol: RET
RET
Follicular Variant Thyroid Gland Papillary Carcinoma
0.080 GeneticVariation BEFREE In sharp contrast to the findings in classical PTC (4% of cases), CGH analysis demonstrated that both FVPTC (59% of cases) and FTA/FTC (36% of cases) were commonly characterized by aneuploidy (P = 0.0002). 15188460

2004

Entrez Id: 5468
Gene Symbol: PPARG
PPARG
Follicular Variant Thyroid Gland Papillary Carcinoma
0.060 Biomarker BEFREE PAX8/PPARG fusion was found in I-EFVPTCs and FTC. 31671409

2019

Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
Follicular Variant Thyroid Gland Papillary Carcinoma
0.060 AlteredExpression BEFREE RET-PTC1 and RET-PTC3 rearrangements were present (11.5%) only in infiltrative FVPTCs. 28940583

2018

Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
Follicular Variant Thyroid Gland Papillary Carcinoma
0.060 Biomarker BEFREE FVPTC was significantly less likely to be classified sonographically as malignant (U5) (p = 0.006) or suspicious/malignant (U4/5) (p = 0.009) than conventional PTC. 28396943

2017