Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		1.000 0.950 4 2004 2020
dbSNP: rs6679677
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 3 2007 2015
dbSNP: rs2269241
rs2269241
PGM1
1.000 0.120 1 63643100 intron variant T/C snv 0.23
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2009 2009
dbSNP: rs3024493
rs3024493
IL10 ; IL19
0.776 0.280 1 206770623 intron variant C/A;T snv 0.11
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2011 2011
dbSNP: rs3024505
rs3024505 		0.790 0.320 1 206766559 upstream gene variant G/A snv 0.11
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2009 2015
dbSNP: rs672797
rs672797 		1.000 0.120 1 81094869 downstream gene variant C/A;T snv 0.63
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1990760
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.900 0.955 3 2007 2018
dbSNP: rs3087243
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.860 0.800 2 2007 2019
dbSNP: rs11571316
rs11571316
CTLA4
0.925 0.160 2 203866366 upstream gene variant G/A;C snv
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2011 2011
dbSNP: rs478222
rs478222
EFR3B
1.000 0.120 2 25078886 intron variant A/T snv 0.35
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2011 2011
dbSNP: rs6547853
rs6547853 		1.000 0.120 2 28423934 upstream gene variant G/A snv 0.35
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2011 2011
dbSNP: rs10517086
rs10517086
LINC02357
0.882 0.160 4 26083889 intron variant G/A snv 0.27
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2009 2009
dbSNP: rs4505848
rs4505848
KIAA1109
0.776 0.400 4 122211337 intron variant A/G snv 0.29
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2009 2009
dbSNP: rs286405
rs286405 		1.000 0.120 5 35577155 intergenic variant C/T snv 0.54
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2010 2010
dbSNP: rs11755527
rs11755527
BACH2
0.851 0.360 6 90248512 intron variant C/G snv 0.36
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 2 2008 2011
dbSNP: rs9272346
rs9272346
HLA-DQA1
0.790 0.320 6 32636595 intron variant G/A snv 0.54
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 2 2007 2015
dbSNP: rs1003878
rs1003878
TSBP1 ; TSBP1-AS1
0.882 0.200 6 32332045 stop gained G/A snv 0.19 0.23
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1012411
rs1012411 		1.000 0.120 6 30364778 upstream gene variant T/G snv 0.32
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1015166
rs1015166
TAP2
0.925 0.120 6 32830954 intron variant C/G;T snv 0.28
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2007 2015
dbSNP: rs1041981
rs1041981
LTA ; LOC100287329
0.667 0.520 6 31573007 missense variant C/A snv 0.35 0.38
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs10484566
rs10484566
PSMB9
0.925 0.200 6 32867481 regulatory region variant T/G snv 6.8E-02
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1052486
rs1052486
BAG6
0.851 0.200 6 31642909 missense variant A/G snv 0.51 0.44
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1053924
rs1053924
PPT2 ; PRRT1 ; LOC100507547 ; PPT2-EGFL8
1.000 0.120 6 32152938 non coding transcript exon variant T/C snv 0.71
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1055569
rs1055569
HCP5 ; HCG26
0.882 0.240 6 31472305 non coding transcript exon variant C/T snv 0.41
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1058026
rs1058026
HLA-B
0.925 0.120 6 31353908 3 prime UTR variant A/C snv 0.21
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007