Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs10758593
rs10758593
GLIS3
0.827 0.240 9 4292083 intron variant G/A snv 0.45
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.710 0.500 1 2011 2017
dbSNP: rs7020673
rs7020673
GLIS3
0.882 0.200 9 4291747 intron variant C/A;G snv
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 0.500 1 2009 2017
dbSNP: rs1893217
rs1893217
PTPN2
0.742 0.440 18 12809341 intron variant A/G snv 0.12
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.830 0.667 2 2009 2019
dbSNP: rs3087243
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.860 0.800 2 2007 2019
dbSNP: rs763361
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.900 0.917 1 2007 2015
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		1.000 0.950 4 2004 2020
dbSNP: rs1990760
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.900 0.955 3 2007 2018
dbSNP: rs12708716
rs12708716
CLEC16A
0.807 0.320 16 11086016 intron variant A/G snv 0.37
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 4 2007 2011
dbSNP: rs17696736
rs17696736
NAA25
0.827 0.240 12 112049014 intron variant A/G snv 0.30
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 3 2007 2010
dbSNP: rs2292239
rs2292239
ERBB3
0.742 0.480 12 56088396 intron variant T/G snv 0.65
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.830 1.000 3 2007 2019
dbSNP: rs6679677
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 3 2007 2015
dbSNP: rs11203203
rs11203203
UBASH3A
0.807 0.240 21 42416077 intron variant G/A snv 0.28
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 2 2009 2012
dbSNP: rs11755527
rs11755527
BACH2
0.851 0.360 6 90248512 intron variant C/G snv 0.36
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 2 2008 2011
dbSNP: rs229541
rs229541
C1QTNF6
0.807 0.200 22 37195278 intron variant G/A snv 0.49
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 2 2008 2015
dbSNP: rs2542151
rs2542151 		0.763 0.480 18 12779948 upstream gene variant G/T snv 0.83
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.830 1.000 2 2007 2015
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.820 1.000 2 2009 2018
dbSNP: rs3825932
rs3825932
CTSH
0.827 0.360 15 78943104 intron variant T/C snv 0.50
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 2 2008 2009
dbSNP: rs7111341
rs7111341 		0.925 0.120 11 2191936 regulatory region variant C/T snv 0.29
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 2 2007 2009
dbSNP: rs9272346
rs9272346
HLA-DQA1
0.790 0.320 6 32636595 intron variant G/A snv 0.54
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 2 2007 2015
dbSNP: rs1003878
rs1003878
TSBP1 ; TSBP1-AS1
0.882 0.200 6 32332045 stop gained G/A snv 0.19 0.23
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1004446
rs1004446
IGF2 ; IGF2-AS ; INS-IGF2
0.827 0.240 11 2148913 intron variant G/A snv 0.37
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.810 1.000 1 2007 2017
dbSNP: rs1012411
rs1012411 		1.000 0.120 6 30364778 upstream gene variant T/G snv 0.32
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1015166
rs1015166
TAP2
0.925 0.120 6 32830954 intron variant C/G;T snv 0.28
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.800 1.000 1 2007 2015
dbSNP: rs10255021
rs10255021
COL1A2
1.000 0.120 7 94402493 intron variant G/A snv 0.13
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs1041981
rs1041981
LTA ; LOC100287329
0.667 0.520 6 31573007 missense variant C/A snv 0.35 0.38
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007