Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs7574865
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs20541
rs20541
IL13 ; TH2LCRR
0.585 0.720 5 132660272 missense variant A/G snv 0.72 0.77
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs3087243
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs10936599
rs10936599
MYNN
0.637 0.600 3 169774313 synonymous variant C/T snv 0.29 0.21
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.800 1.000 1 2011 2011
dbSNP: rs6679677
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs2104286
rs2104286
IL2RA
0.662 0.440 10 6057082 intron variant T/C snv 0.18
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.900 1.000 3 2007 2019
dbSNP: rs1990760
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.730 1.000 1 2009 2020
dbSNP: rs653178
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs6897932
rs6897932
IL7R
0.683 0.560 5 35874473 missense variant C/T snv 0.23 0.21
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.900 0.909 2 2007 2018
dbSNP: rs2736340
rs2736340 		0.683 0.480 8 11486464 upstream gene variant C/T snv 0.25
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.710 1.000 1 2011 2011
dbSNP: rs6822844
rs6822844 		0.689 0.520 4 122588266 regulatory region variant G/T snv 0.10
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.710 1.000 1 2009 2011
dbSNP: rs744166
rs744166
STAT3
0.689 0.560 17 42362183 intron variant A/G snv 0.48
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.820 1.000 1 2010 2012
dbSNP: rs763361
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.770 1.000 1 2009 2018
dbSNP: rs706778
rs706778
IL2RA
0.695 0.320 10 6056986 intron variant C/T snv 0.46
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs917997
rs917997 		0.701 0.480 2 102454108 downstream gene variant T/A;C snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs2201841
rs2201841
IL23R ; C1orf141
0.716 0.440 1 67228519 intron variant A/G;T snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs2076530
rs2076530
BTNL2 ; TSBP1-AS1
0.724 0.640 6 32396039 missense variant T/C snv 0.42 0.40
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs9275572
rs9275572 		0.724 0.360 6 32711222 upstream gene variant A/G;T snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs3197999
rs3197999
APEH ; MST1
0.732 0.280 3 49684099 missense variant G/A snv 0.26 0.27
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs4810485
rs4810485
CD40
0.732 0.480 20 46119308 intron variant T/A;G snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.810 1.000 1 2011 2018
dbSNP: rs6887695
rs6887695 		0.732 0.440 5 159395637 intron variant G/C snv 0.35
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.720 0.667 1 2011 2017
dbSNP: rs7708392
rs7708392
TNIP1
0.732 0.400 5 151077924 intron variant G/C snv 0.44
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs10488631
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011
dbSNP: rs1893217
rs1893217
PTPN2
0.742 0.440 18 12809341 intron variant A/G snv 0.12
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2011 2011