Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs11190140
rs11190140
NKX2-3 ; LINC01475
0.827 0.160 10 99531836 upstream gene variant T/C snv 0.55
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2008 2014
dbSNP: rs11190141
rs11190141
NKX2-3 ; LINC01475
1.000 0.040 10 99532633 upstream gene variant C/T snv 0.40
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2012
dbSNP: rs11209032
rs11209032 		0.752 0.400 1 67274409 upstream gene variant G/A snv 0.30
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.710 1.000 1 2006 2013
dbSNP: rs11574514
rs11574514
PSMB10
1.000 0.040 16 67937477 upstream gene variant C/T snv 2.9E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2012
dbSNP: rs12242110
rs12242110
CCNY
1.000 0.040 10 35246767 upstream gene variant A/G snv 0.32
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2010 2010
dbSNP: rs12576495
rs12576495 		1.000 0.040 11 93131841 upstream gene variant T/C snv 0.23
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2007 2007
dbSNP: rs12985909
rs12985909 		1.000 0.040 19 18328573 upstream gene variant C/T snv 0.51
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2008 2008
dbSNP: rs1728918
rs1728918 		0.827 0.160 2 27412596 upstream gene variant A/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2012
dbSNP: rs1799964
rs1799964
LTA ; TNF ; LOC100287329
0.608 0.760 6 31574531 upstream gene variant T/C snv 0.19
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2010 2010
dbSNP: rs1992660
rs1992660 		1.000 0.040 5 40414965 upstream gene variant C/T snv 0.58
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2007 2007
dbSNP: rs2149085
rs2149085
RNASET2
1.000 0.040 6 166957622 upstream gene variant T/C snv 0.58
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2014 2014
dbSNP: rs247660
rs247660 		1.000 0.040 5 85462322 upstream gene variant A/C snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2008 2008
dbSNP: rs2858332
rs2858332 		1.000 0.040 6 32713384 upstream gene variant G/T snv 0.54
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2013 2013
dbSNP: rs3024505
rs3024505 		0.790 0.320 1 206766559 upstream gene variant G/A snv 0.11
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 0.875 1 2008 2017
dbSNP: rs3091315
rs3091315 		1.000 0.040 17 34266646 upstream gene variant A/G snv 0.33
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2010 2015
dbSNP: rs3091316
rs3091316 		1.000 0.040 17 34266955 upstream gene variant G/A;C snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2017
dbSNP: rs3763313
rs3763313
BTNL2
0.807 0.320 6 32408694 upstream gene variant A/C snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2008 2008
dbSNP: rs4409764
rs4409764 		0.925 0.040 10 99524480 upstream gene variant T/A;G snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 1 2010 2019
dbSNP: rs4574921
rs4574921 		0.882 0.160 9 114776054 upstream gene variant C/T snv 0.80
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs4802307
rs4802307
PPP5C
0.827 0.120 19 46346549 upstream gene variant G/T snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2017
dbSNP: rs6545946
rs6545946
TMEM17 ; LOC105374764
1.000 0.040 2 62486398 upstream gene variant C/T snv 0.25
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2012 2012
dbSNP: rs694739
rs694739
LOC102723878
0.763 0.320 11 64329761 upstream gene variant A/G snv 0.28
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 1 2010 2010
dbSNP: rs7646366
rs7646366 		1.000 0.040 3 49433235 upstream gene variant G/A snv 0.29
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2007 2007
dbSNP: rs7765379
rs7765379 		0.827 0.280 6 32713151 upstream gene variant T/G snv 0.10
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2013 2013
dbSNP: rs7848647
rs7848647
TNFSF15
0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.840 1.000 1 2005 2018