Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs958335893
rs958335893
ALK
1.000 0.080 2 29193478 missense variant C/T snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2015 2015
dbSNP: rs919968
rs919968
ANKRD34C-AS1
1.000 0.080 15 79205004 intron variant T/A;G snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2015 2015
dbSNP: rs41997
rs41997
ANKRD7
1.000 0.080 7 118351841 intron variant A/G snv 0.27
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.710 1.000 1 2012 2012
dbSNP: rs369137693
rs369137693
ANTXR1
0.925 0.200 2 69193414 missense variant C/T snv 2.8E-05 1.4E-05
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs747908253
rs747908253
ANTXR1
0.925 0.200 2 69182599 missense variant G/A snv 1.6E-05
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs1130409
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.030 1.000 3 2011 2014
dbSNP: rs148298598
rs148298598
APEX1
0.925 0.200 14 20457111 missense variant G/A snv 2.3E-04 2.1E-04
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs2307486
rs2307486
APEX1 ; OSGEP
0.790 0.240 14 20456045 missense variant A/G snv 7.4E-03 2.1E-03
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs753254929
rs753254929
APEX1 ; OSGEP
0.851 0.080 14 20455915 missense variant G/A;C snv 1.6E-05
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2007 2007
dbSNP: rs751661633
rs751661633
APOBEC3B ; APOBEC3A
0.851 0.120 22 38984136 missense variant C/A snv 4.1E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.020 0.500 2 2010 2015
dbSNP: rs2241880
rs2241880
ATG16L1 ; SCARNA5
0.627 0.600 2 233274722 missense variant A/G snv 0.45 0.44
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs10898880
rs10898880
ATG16L2 ; LOC107984421
0.925 0.160 11 72814066 upstream gene variant C/A snv 0.50
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2018 2018
dbSNP: rs763375936
rs763375936
ATG3
0.827 0.160 3 112532749 missense variant C/T snv 8.3E-06 7.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs772776695
rs772776695
ATG3
0.827 0.160 3 112548576 missense variant T/A snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs2245214
rs2245214
ATG5
0.827 0.240 6 106214866 intron variant C/G snv 0.42
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2018 2018
dbSNP: rs751688663
rs751688663
ATG7
0.807 0.280 3 11340656 missense variant G/A snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2017 2017
dbSNP: rs228590
rs228590
ATM
1.000 0.080 11 108225414 5 prime UTR variant A/G snv 0.52
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2013 2013
dbSNP: rs170548
rs170548
ATM ; C11orf65
1.000 0.080 11 108364109 intron variant A/C;T snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2007 2007
dbSNP: rs227060
rs227060
ATM ; C11orf65
0.882 0.160 11 108334154 intron variant C/T snv 0.27
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2007 2007
dbSNP: rs189037
rs189037
ATM ; NPAT
0.689 0.400 11 108223106 5 prime UTR variant G/A snv 0.49
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2013 2013
dbSNP: rs9526814
rs9526814
ATP7B
1.000 0.080 13 51965390 intron variant T/G snv 0.35
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2018 2018
dbSNP: rs9535826
rs9535826
ATP7B
0.851 0.080 13 51991990 intron variant T/C;G snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2018 2018
dbSNP: rs2227928
rs2227928
ATR
0.851 0.200 3 142562770 missense variant A/G snv 0.55 0.63
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs767935771
rs767935771
AXL
0.827 0.080 19 41259690 missense variant T/C snv 1.6E-05 5.6E-05
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.030 1.000 3 2016 2019
dbSNP: rs3117582
rs3117582
BAG6 ; APOM
0.716 0.440 6 31652743 intron variant T/G snv 7.1E-02
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2015 2015