Source: CURATED

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs17879961
rs17879961
CUI: C0678222
Disease: Breast Carcinoma
Breast Carcinoma
G 0.900 GeneticVariation GWASCAT Association analysis identifies 65 new breast cancer risk loci. 29059683

2017

dbSNP: rs17879961
rs17879961
CUI: C0678222
Disease: Breast Carcinoma
Breast Carcinoma
G 0.900 GeneticVariation GWASCAT Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer. 25751625

2015

dbSNP: rs17879961
rs17879961
CUI: C0678222
Disease: Breast Carcinoma
Breast Carcinoma
G 0.900 GeneticVariation CLINVAR

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.810 GeneticVariation CLINVAR Association Between Inherited Germline Mutations in Cancer Predisposition Genes and Risk of Pancreatic Cancer. 29922827

2018

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.810 GeneticVariation CLINVAR Implementation of next-generation sequencing for molecular diagnosis of hereditary breast and ovarian cancer highlights its genetic heterogeneity. 27553368

2016

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.810 GeneticVariation CLINVAR Breast cancer risk is similar for CHEK2 founder and non-founder mutation carriers. 27751358

2016

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.810 GeneticVariation CLINVAR Prevalence of mutations in a panel of breast cancer susceptibility genes in BRCA1/2-negative patients with early-onset breast cancer. 25503501

2015

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT In patients without family history, Y390C carriers tend to develop breast cancer early, before 35 years of age. 25619829

2015

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT Summaries for patients. Assessing the genetic risk for BRCA-related breast or ovarian cancer in women: recommendations from the U.S. Preventive Services Task Force. 24366402

2014

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT Risk assessment, genetic counseling, and genetic testing for BRCA-related cancer in women: U.S. Preventive Services Task Force recommendation statement. 24366376

2014

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT A recurrent CHEK2 p.H371Y mutation is associated with breast cancer risk in Chinese women. 21618645

2011

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.810 GeneticVariation CLINVAR CHEK2 contribution to hereditary breast cancer in non-BRCA families. 22114986

2011

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT The emerging landscape of breast cancer susceptibility. 18163131

2008

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT Risk assessment and genetic counseling for hereditary breast and ovarian cancer: recommendations of the National Society of Genetic Counselors. 17508274

2007

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT Genetic cancer risk assessment and counseling: recommendations of the national society of genetic counselors. 15604628

2004

dbSNP: rs200928781
rs200928781
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
0.810 GeneticVariation UNIPROT A CHEK2 genetic variant contributing to a substantial fraction of familial breast cancer. 12094328

2002

dbSNP: rs738722
rs738722
CUI: C0014859
Disease: Esophageal Neoplasms
Esophageal Neoplasms
T 0.810 GeneticVariation GWASCAT A shared susceptibility locus in PLCE1 at 10q23 for gastric adenocarcinoma and esophageal squamous cell carcinoma. 20729852

2010

dbSNP: rs738722
rs738722
CUI: C0014859
Disease: Esophageal Neoplasms
Esophageal Neoplasms
T 0.810 GeneticVariation GWASDB A shared susceptibility locus in PLCE1 at 10q23 for gastric adenocarcinoma and esophageal squamous cell carcinoma. 20729852

2010

dbSNP: rs137853007
rs137853007
CUI: C1836482
Disease: Li-Fraumeni Syndrome 2
Li-Fraumeni Syndrome 2
0.800 GeneticVariation UNIPROT Destabilization of CHK2 by a missense mutation associated with Li-Fraumeni Syndrome. 11719428

2001

dbSNP: rs137853007
rs137853007
CUI: C1836482
Disease: Li-Fraumeni Syndrome 2
Li-Fraumeni Syndrome 2
A 0.800 CausalMutation CLINVAR

dbSNP: rs137853008
rs137853008
CUI: C0029463
Disease: Osteosarcoma
Osteosarcoma
0.800 GeneticVariation UNIPROT

dbSNP: rs137853008
rs137853008
CUI: C0029463
Disease: Osteosarcoma
Osteosarcoma
A 0.800 CausalMutation CLINVAR

dbSNP: rs17879961
rs17879961
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.800 GeneticVariation CLINVAR CHEK2 mutations and the risk of papillary thyroid cancer. 25583358

2015

dbSNP: rs17879961
rs17879961
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.800 GeneticVariation CLINVAR Rare variants of large effect in BRCA2 and CHEK2 affect risk of lung cancer. 24880342

2014

dbSNP: rs17879961
rs17879961
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast
G 0.800 GeneticVariation CLINVAR In total, 26,336 cases and 44,219 controls from 18 case-control studies were used in this meta-analysis, and significant associations of the CHEK2 I157T variant with cancer susceptibility were found (OR, 1.39; 95% CI, 1.19-1.63; p<0.0001), breast cancer (OR=1.58, 95% CI=1.42-1.75, p<0.00001) and colorectal cancer (OR=1.67, 95% CI=1.24-2.26, p=0.0008). 23713947

2013