Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs9111
rs9111
0.010 GeneticVariation BEFREE <i>Bach2</i> repression mediates Th17 cell induced inflammation and rs9111-TT in individuals with primary genetic susceptibility to CP is associated with clinical features of advanced disease. 29511557

2018

dbSNP: rs1042636
rs1042636
0.010 GeneticVariation BEFREE Our United States-based study confirmed an association of CASR and CP and for the first time demonstrated that CASR R990G is a significant risk factor for CP. 18680227

2008

dbSNP: rs773552397
rs773552397
0.010 GeneticVariation BEFREE In particular, the kindred with the R896H mutation presenting with a similar pedigree to the family described above may indicate a role for CASR gene mutations in SPINK1-related CP. 16497624

2006

dbSNP: rs113857788
rs113857788
0.010 GeneticVariation BEFREE A SPINK1 N34S was detected as a heterozygote in one (2.4%) patient with alcoholic chronic pancreatitis and a heterozygote CFTR Q1352H was detected in one other patient. 16187186

2005

dbSNP: rs139729994
rs139729994
0.010 GeneticVariation BEFREE The data suggest that the Japanese-specific CFTR variant L1156F causes mild dysfunction of CFTR and increases the risk of alcoholic chronic pancreatitis in Japanese. 26089335

2015

dbSNP: rs78655421
rs78655421
0.010 GeneticVariation BEFREE Here we describe a case of a patient with CF (R117H/7 T/F508del) who presented with recurrent pancreatitis who was effectively treated with ivacaftor in the absence of respiratory symptoms. 31296159

2019

dbSNP: rs213950
rs213950
0.010 GeneticVariation BEFREE While the T5 allele is a mutation that is over-represented in patients with chronic pancreatitis, no data are available concerning the possible allelic preference at the other two polymorphic loci, (TG)m and M470V, in these patients. 10668931

1999

dbSNP: rs12008279
rs12008279
0.010 GeneticVariation BEFREE Our study confirmed a significant association of 2 variants in CLDN2 gene (rs4409525-OR 1.71, P = 1.38 x 10-09; rs12008279-OR 1.56, P = 1.53 x 10-04) and 2 variants in MORC4 gene (rs12688220-OR 1.72, P = 9.20 x 10-09; rs6622126-OR 1.75, P = 4.04x10-05) in Indian patients with CP. 26820620

2016

dbSNP: rs7057398
rs7057398
0.020 GeneticVariation BEFREE The single-nucleotide polymorphisms rs10273639 at the PRSS1-PRSS2 locus and rs7057398 and rs12688220 at the CLDN2-MORC4 locus are associated with CP and strongly associate with ACP, but only rs7057398 with NACP in female patients. 25253127

2015

dbSNP: rs7057398
rs7057398
0.020 GeneticVariation BEFREE In this study, we have demonstrated the association of claudin2 (rs7057398) polymorphism with IRAP and progression of IRAP to CP, and PRSS1 (rs10273639) polymorphism with IRAP and ICP. 26110235

2015

dbSNP: rs777418530
rs777418530
0.020 GeneticVariation BEFREE Approximately 15-40% of patients with so-called idiopathic CP carry p.N34S on one allele or on both alleles. 21525753

2010

dbSNP: rs777418530
rs777418530
0.020 GeneticVariation BEFREE Since the N34S variant of the SPINK1 trypsin inhibitor gene has been found to partially account for genetic susceptibility to chronic pancreatitis, we used a family-based and case-control approach in two separate ethnic groups from the Indian subcontinent, to determine whether N34S was associated with susceptibility to FCPD. 12187509

2002

dbSNP: rs1413293653
rs1413293653
0.010 GeneticVariation BEFREE Extended analysis of the p.T167A variant revealed no association to CP and in functional assays p.T167A showed normal secretion and activity. 20484962

2010

dbSNP: rs775626498
rs775626498
0.010 GeneticVariation BEFREE Extended analysis of the p.T167A variant revealed no association to CP and in functional assays p.T167A showed normal secretion and activity. 20484962

2010

dbSNP: rs1553134935
rs1553134935
G 0.700 GeneticVariation CLINVAR

dbSNP: rs121909293
rs121909293
0.020 GeneticVariation BEFREE Two CTRC alterations, p.R254W and p.K247_R254del, are significantly associated with idiopathic as well as alcohol-related CP. 21525753

2010

dbSNP: rs121909293
rs121909293
0.020 GeneticVariation BEFREE For the first time, we demonstrated that the c.180TT genotype of common p.Gly60Gly variant is strong, an independent CP risk factor (OR = 23; 95% CI 7.7-70; P < 0.001) with effect size comparable to p.Arg254Trp mutation. 28968289

2017

dbSNP: rs497078
rs497078
0.020 GeneticVariation BEFREE Our study provides evidence that CTRC variants, including c.180TT (p.Gly60Gly) are strong CP risk factors. 28968289

2017

dbSNP: rs497078
rs497078
0.020 GeneticVariation BEFREE The authors also observed significant association for the synonymous variant c.180C>T (p.(=)) with CP (OR 2.71, 95% CI 1.79 to 4.12, p=5.3 × 10(-7)). 22580415

2013

dbSNP: rs747940576
rs747940576
0.010 GeneticVariation BEFREE Two common haplotypes, c.101A>G (p.N34S) and c.-215G>A, and four intronic alterations of the serine protease inhibitor Kazal type 1 (SPINK1) gene have been found to increase the risk for CP in the Asia Pacific region. 21323990

2011

dbSNP: rs762727745
rs762727745
0.010 GeneticVariation BEFREE The authors also observed significant association for the synonymous variant c.180C>T (p.(=)) with CP (OR 2.71, 95% CI 1.79 to 4.12, p=5.3 × 10(-7)). 22580415

2013

dbSNP: rs980303898
rs980303898
0.010 GeneticVariation BEFREE In the pancreata of Pdx1-Cre; LSL-Kras(G12D) mice, exendin-4 led to acceleration of the disruption of exocrine architecture and chronic pancreatitis with mucinous metaplasia and increased formation of murine PanIN lesions. 22266668

2012

dbSNP: rs587777636
rs587777636
0.010 GeneticVariation BEFREE One patient with severe type 5 hyperlipoproteinemia (MIM 144650), fasting chylomicronemia and relapsing pancreatitis resistant to standard therapy was found to be homozygous for a novel GPIHBP1 missense variant, namely G56R. 17883852

2007

dbSNP: rs1799945
rs1799945
0.010 GeneticVariation BEFREE Although hemochromatosis is associated with pancreatic pathology, the p.C282Y and p.H63D variants do not play a significant role in the pathogenesis of chronic pancreatitis or pancreatic adenocarcinoma. 17666895

2007

dbSNP: rs1800562
rs1800562
0.010 GeneticVariation BEFREE Although hemochromatosis is associated with pancreatic pathology, the p.C282Y and p.H63D variants do not play a significant role in the pathogenesis of chronic pancreatitis or pancreatic adenocarcinoma. 17666895

2007