Disease: Serum LDL cholesterol measurement
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 24
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 24
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 20
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 17
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 15
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 12
rs157580
TOMM40
0.882 0.160 19 44892009 intron variant G/A snv 0.69 11
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 11
rs174570
FADS2
0.882 0.200 11 61829740 intron variant C/T snv 0.15 10
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 10
rs6511720
LDLR
0.790 0.120 19 11091630 intron variant G/T snv 0.12 10
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 9
rs599839
PSRC1
0.724 0.360 1 109279544 downstream gene variant G/A;C snv 9
rs12740374
CELSR2
0.851 0.040 1 109274968 3 prime UTR variant G/T snv 0.22 8
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 8
rs11206510 0.763 0.240 1 55030366 intergenic variant T/A;C;G snv 7
rs1122608
SMARCA4
0.763 0.120 19 11052925 intron variant G/T snv 0.18 7
rs17321515 0.776 0.200 8 125474167 intron variant A/G snv 0.49 7
rs2650000
HNF1A-AS1
0.851 0.200 12 120951159 intron variant A/C snv 0.70 7
rs6589566
ZPR1
0.882 0.080 11 116781707 intron variant G/A;C;T snv 7
rs693
APOB
0.708 0.440 2 21009323 synonymous variant G/A snv 0.39 0.38 7
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 6
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 6
rs11668477 0.925 0.080 19 11084354 downstream gene variant A/G snv 0.34 6
rs2228671
LDLR
0.790 0.160 19 11100236 stop gained C/A;G;T snv 1.6E-05; 8.9E-02 6