IFNG-AS1, IFNG antisense RNA 1, 100885789

N. diseases: 33; N. variants: 24
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7134599
rs7134599
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0021390
Disease:
Inflammatory Bowel Diseases 		0.810 GeneticVariation BEFREE The significance of these results is amplified by studies suggesting that a single nucleotide polymorphism in IFNG-AS1, rs7134599, was associated with both subtypes of IBD patients independently of race. 31545920 2020
dbSNP: rs7134599
rs7134599
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0021390
Disease:
Inflammatory Bowel Diseases 		A 0.810 GeneticVariation GWASDB Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233 2012
dbSNP: rs7134599
rs7134599
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0021390
Disease:
Inflammatory Bowel Diseases 		A 0.810 GeneticVariation GWASCAT Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233 2012
dbSNP: rs7134599
rs7134599
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASCAT Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. 21297633 2011
dbSNP: rs7134599
rs7134599
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASDB Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. 21297633 2011
dbSNP: rs1558744
rs1558744
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASCAT Genome-wide association identifies multiple ulcerative colitis susceptibility loci. 20228799 2010
dbSNP: rs1558744
rs1558744
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASDB Genome-wide association identifies multiple ulcerative colitis susceptibility loci. 20228799 2010
dbSNP: rs1558744
rs1558744
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASDB In an analysis that controlled for gender and population structure, ulcerative colitis loci attaining genome-wide significance and subsequent replication in two independent populations were identified on chromosomes 1p36 (rs6426833, combined P = 5.1 x 10(-13), combined odds ratio OR = 0.73) and 12q15 (rs1558744, combined P = 2.5 x 10(-12), combined OR = 1.35). 19122664 2009
dbSNP: rs1558744
rs1558744
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.800 GeneticVariation GWASCAT In an analysis that controlled for gender and population structure, ulcerative colitis loci attaining genome-wide significance and subsequent replication in two independent populations were identified on chromosomes 1p36 (rs6426833, combined P = 5.1 x 10(-13), combined odds ratio OR = 0.73) and 12q15 (rs1558744, combined P = 2.5 x 10(-12), combined OR = 1.35). 19122664 2009
dbSNP: rs2870946
rs2870946
Entrez Id: 55801;100885789;105369818
Gene Symbol: IL26;IFNG-AS1;LOC105369818
IL26;IFNG-AS1;LOC105369818
CUI: C0009324
Disease:
Ulcerative Colitis 		G 0.800 GeneticVariation GWASCAT Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. 19122664 2009
dbSNP: rs2870946
rs2870946
Entrez Id: 55801;100885789;105369818
Gene Symbol: IL26;IFNG-AS1;LOC105369818
IL26;IFNG-AS1;LOC105369818
CUI: C0009324
Disease:
Ulcerative Colitis 		G 0.800 GeneticVariation GWASDB Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. 19122664 2009
dbSNP: rs11177053
rs11177053
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0020676
Disease:
Hypothyroidism 		0.700 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370 2019
dbSNP: rs1548654
rs1548654
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0410702
Disease:
Adolescent idiopathic scoliosis 		0.700 GeneticVariation GWASCAT The coexistence of copy number variations (CNVs) and single nucleotide polymorphisms (SNPs) at a locus can result in distorted calculations of the significance in associating SNPs to disease. 30019117 2018
dbSNP: rs1548654
rs1548654
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C1837461
Disease:
SCOLIOSIS, ISOLATED, SUSCEPTIBILITY TO, 3 		0.700 GeneticVariation GWASCAT The coexistence of copy number variations (CNVs) and single nucleotide polymorphisms (SNPs) at a locus can result in distorted calculations of the significance in associating SNPs to disease. 30019117 2018
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		0.700 GeneticVariation GWASCAT Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease. 28067908 2017
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0021390
Disease:
Inflammatory Bowel Diseases 		0.700 GeneticVariation GWASCAT Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease. 28067908 2017
dbSNP: rs2041862
rs2041862
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0024141
Disease:
Lupus Erythematosus, Systemic 		0.700 GeneticVariation GWASCAT Transancestral mapping and genetic load in systemic lupus erythematosus. 28714469 2017
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0010346
Disease:
Crohn Disease 		0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0038013
Disease:
Ankylosing spondylitis 		0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0008313
Disease:
Cholangitis, Sclerosing 		0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs11614178
rs11614178
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0033860
Disease:
Psoriasis 		0.700 GeneticVariation GWASCAT Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci. 26974007 2016
dbSNP: rs12318183
rs12318183
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0021390
Disease:
Inflammatory Bowel Diseases 		0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919 2015
dbSNP: rs2216164
rs2216164
Entrez Id: 100885789
Gene Symbol: IFNG-AS1
IFNG-AS1
CUI: C0002171
Disease:
Alopecia Areata 		G 0.700 GeneticVariation GWASCAT Genome-wide meta-analysis in alopecia areata resolves HLA associations and reveals two new susceptibility loci. 25608926 2015
dbSNP: rs7134472
rs7134472
Entrez Id: 100885789;107984526
Gene Symbol: IFNG-AS1;LOC107984526
IFNG-AS1;LOC107984526
CUI: C0009324
Disease:
Ulcerative Colitis 		A 0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919 2015