Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression BEFREE Elevated P53 expression correlates with a history of heavy smoking in squamous cell carcinoma of the head and neck. 1911200

1991

Entrez Id: 5728
Gene Symbol: PTEN
PTEN
Squamous cell carcinoma of the head and neck
0.800 Biomarker GENOMICS_ENGLAND Multiple hamartoma syndrome (Cowden's disease). 4635800

1972

Entrez Id: 7124
Gene Symbol: TNF
TNF
Squamous cell carcinoma of the head and neck
0.100 AlteredExpression BEFREE In HNSCC, enhanced expression of TNF receptors on the cancer cells occurs and is likely to contribute to the regulation of TNF and its activation of tumor cells within the tumor microenvironment; targeting these receptors in cancer cells may provide a new approach to controlling tumor growth and metastasis. 7485723

1995

Entrez Id: 4049
Gene Symbol: LTA
LTA
Squamous cell carcinoma of the head and neck
0.020 AlteredExpression BEFREE To determine if tumor necrosis factor (TNF) receptors are upregulated in tumor cells, we measured the distribution and levels of TNF-alpha and TNF-beta, and TNF receptors RI and RII, in head and neck squamous cell carcinoma (HNSCC) tumor specimens and normal control specimens. 7485723

1995

Entrez Id: 27306
Gene Symbol: HPGDS
HPGDS
Squamous cell carcinoma of the head and neck
0.100 GeneticVariation BEFREE The glutathione S-transferase genotypes of 186 previously untreated patients with squamous cell carcinoma of the head and neck and 42 healthy controls were determined with polymerase chain reaction (PCR) methodologies. 7485742

1995

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
Squamous cell carcinoma of the head and neck
0.500 Biomarker BEFREE CDKN2 does not appear to be the only TSG on 9p21 in HNSCC, and our results suggest that another region of deletion exists proximal to the IFNW locus. 7542912

1995

Entrez Id: 1019
Gene Symbol: CDK4
CDK4
Squamous cell carcinoma of the head and neck
0.390 Biomarker BEFREE We report homozygous deletion of the recently identified multiple tumor suppressor I (MTSI)/cyclin-dependent kinase-4-inhibitor (CDKN2) gene mapped to 9p21, which encodes the p16 protein, a regulator of cyclin-dependent kinase 4, in six of 16 HNSCC cell lines. 7542912

1995

Entrez Id: 1017
Gene Symbol: CDK2
CDK2
Squamous cell carcinoma of the head and neck
0.340 Biomarker BEFREE CDKN2 does not appear to be the only TSG on 9p21 in HNSCC, and our results suggest that another region of deletion exists proximal to the IFNW locus. 7542912

1995

Entrez Id: 595
Gene Symbol: CCND1
CCND1
Squamous cell carcinoma of the head and neck
0.400 AlteredExpression BEFREE Cyclin D1 (PRAD1, CCND1) and glutathione-S-transferase pi gene expression in head and neck squamous cell carcinoma. 7590696

1995

Entrez Id: 27306
Gene Symbol: HPGDS
HPGDS
Squamous cell carcinoma of the head and neck
0.100 AlteredExpression BEFREE Cyclin D1 (PRAD1, CCND1) and glutathione-S-transferase pi gene expression in head and neck squamous cell carcinoma. 7590696

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 Biomarker BEFREE We demonstrated previously that overexpression of the wild-type p53 gene in squamous cell carcinoma of the head and neck cell lines via adenovirus-mediated gene transfer suppressed growth both in vitro and in vivo. 7606733

1995

Entrez Id: 2247
Gene Symbol: FGF2
FGF2
Squamous cell carcinoma of the head and neck
0.060 AlteredExpression BEFREE No correlation was observed between levels of bFGF revealed by immunohistochemical staining and vascular counts in frozen sections derived from 11 different SCCHN tumors. 7615354

1995

Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
Squamous cell carcinoma of the head and neck
0.020 AlteredExpression BEFREE Reverse transcription-polymerase chain reaction and Southern blot transfer of mRNA derived from 7 SCCHN cell lines showed that the IIIb isoform of FGF-receptor 2 (FGFR2) was expressed at high levels, whereas the IIIc isoform and FGFRI were weakly expressed or not detected. 7615354

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation BEFREE Among specimens initially believed to be negative by light microscopy, a substantial percentage of the surgical margins and lymph nodes from patients with squamous-cell carcinoma of the head and neck contained p53 mutations specific for the primary tumor. 7619114

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation BEFREE Cellular immortality: a late event in the progression of human squamous cell carcinoma of the head and neck associated with p53 alteration and a high frequency of allele loss. 7646764

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression BEFREE Thirty-three patients with squamous cell carcinoma of the head and neck region were studied concerning p53 protein expression and mutations in exons 4-9 of the p53 gene using immunohistochemistry, polymerase chain reaction (PCR)-single strand conformation polymorphism analysis and DNA sequencing. 7710950

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression BEFREE In conclusion, increased p53 expression did not correlate with disease progression in our series of patients with invasive SCCHN. 7769953

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 AlteredExpression BEFREE No indication of a clinical or prognostic significance of p53 expression in SCCHN was found. 7804982

1995

Entrez Id: 7157
Gene Symbol: TP53
TP53
Squamous cell carcinoma of the head and neck
0.500 GeneticVariation BEFREE In our study, a history of tobacco and alcohol use was associated with a high frequency of p53 mutations in patients with squamous-cell carcinoma of the head and neck. 7854378

1995

Entrez Id: 595
Gene Symbol: CCND1
CCND1
Squamous cell carcinoma of the head and neck
0.400 AlteredExpression BEFREE Overexpression of cyclin D1 appears to indicate poor prognosis in operable HNSCC. 7867006

1995

Entrez Id: 2248
Gene Symbol: FGF3
FGF3
Squamous cell carcinoma of the head and neck
0.020 PosttranslationalModification BEFREE Amplification of the Int-2 gene in head and neck squamous cell carcinoma. 7876747

1995

Entrez Id: 57508
Gene Symbol: INTS2
INTS2
Squamous cell carcinoma of the head and neck
0.020 PosttranslationalModification BEFREE Amplification of the Int-2 gene in head and neck squamous cell carcinoma. 7876747

1995

Entrez Id: 4790
Gene Symbol: NFKB1
NFKB1
Squamous cell carcinoma of the head and neck
0.060 Biomarker BEFREE The objectives of this Radiation Therapy Oncology Group (RTOG) protocol (91-08) were: (1) to correlate tumor proliferative potential estimated using the p105 assay and deoxyribonucleic acid (DNA) analysis with treatment outcome in patients irradiated for advanced squamous cell carcinoma of the head and neck; and (2) to evaluate the potential of p105 labeling indices as a predictive assay. 7913703

1994

Entrez Id: 4739
Gene Symbol: NEDD9
NEDD9
Squamous cell carcinoma of the head and neck
0.030 Biomarker BEFREE The objectives of this Radiation Therapy Oncology Group (RTOG) protocol (91-08) were: (1) to correlate tumor proliferative potential estimated using the p105 assay and deoxyribonucleic acid (DNA) analysis with treatment outcome in patients irradiated for advanced squamous cell carcinoma of the head and neck; and (2) to evaluate the potential of p105 labeling indices as a predictive assay. 7913703

1994

Entrez Id: 57410
Gene Symbol: SCYL1
SCYL1
Squamous cell carcinoma of the head and neck
0.010 Biomarker BEFREE The objectives of this Radiation Therapy Oncology Group (RTOG) protocol (91-08) were: (1) to correlate tumor proliferative potential estimated using the p105 assay and deoxyribonucleic acid (DNA) analysis with treatment outcome in patients irradiated for advanced squamous cell carcinoma of the head and neck; and (2) to evaluate the potential of p105 labeling indices as a predictive assay. 7913703

1994