Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs12210947
rs12210947
HCG20
1.000 0.120 6 30767328 intron variant A/G snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1264302
rs1264302
VARS2
1.000 0.120 6 30914857 synonymous variant C/T snv 0.32 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1264303
rs1264303
VARS2
1.000 0.120 6 30914736 5 prime UTR variant A/G snv 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1264333
rs1264333
DDR1
1.000 0.120 6 30876537 5 prime UTR variant T/C snv 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1264344
rs1264344 		1.000 0.120 6 30832800 upstream gene variant C/T snv 0.40
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1264432
rs1264432
ABCF1
1.000 0.120 6 30594244 intron variant G/A snv 0.74
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1265110
rs1265110
CCHCR1
1.000 0.120 6 31151645 intron variant C/T snv 0.14
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs13330176
rs13330176 		1.000 0.120 16 85985481 upstream gene variant T/A snv 0.24
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.800 1.000 2 2012 2019
dbSNP: rs1571878
rs1571878
CCR6 ; LOC107986672
1.000 0.120 6 167127354 intron variant C/T snv 0.61
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.800 1.000 2 2012 2019
dbSNP: rs1611710
rs1611710 		1.000 0.120 6 29861139 intron variant C/T snv 0.45
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1611732
rs1611732 		1.000 0.120 6 29863231 intron variant C/T snv 0.45
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs172274
rs172274 		1.000 0.120 6 33001680 downstream gene variant C/T snv 0.37
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs194682
rs194682
HLA-DMB
1.000 0.120 6 32946836 intron variant C/T snv 0.30
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs1953126
rs1953126
PHF19
1.000 0.120 9 120878222 intron variant T/C snv 0.68
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.710 1.000 2 2007 2009
dbSNP: rs1966
rs1966
PSORS1C1 ; PSORS1C2
1.000 0.120 6 31139956 3 prime UTR variant C/T snv 0.23 0.21
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs2022065
rs2022065
TRIM10
1.000 0.120 6 30153683 3 prime UTR variant C/T snv 0.30 0.27
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs204994
rs204994
PBX2
0.925 0.120 6 32187221 non coding transcript exon variant C/T snv 0.18 0.21
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2011
dbSNP: rs2050190
rs2050190
TSBP1 ; TSBP1-AS1
1.000 0.120 6 32371299 intron variant A/G snv 0.35
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs2071596
rs2071596
DDX39B ; ATP6V1G2-DDX39B
1.000 0.120 6 31538914 missense variant G/A snv 0.20 0.22
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs2071800
rs2071800
HLA-DQA2
1.000 0.120 6 32746366 missense variant G/A snv 6.1E-02 5.5E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2011
dbSNP: rs2074506
rs2074506
VARS2
1.000 0.120 6 30922706 missense variant G/T snv 0.32 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs211452
rs211452 		1.000 0.120 6 33363204 downstream gene variant A/G snv 0.34
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs213199
rs213199
VPS52
1.000 0.120 6 33267978 synonymous variant G/A snv 0.39 0.40
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2009
dbSNP: rs2233434
rs2233434
NFKBIE
1.000 0.120 6 44265183 missense variant A/G snv 4.9E-02 5.1E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.810 1.000 2 2012 2016
dbSNP: rs2240335
rs2240335
PADI4
1.000 0.120 1 17348042 synonymous variant C/A snv 0.39 0.37
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.810 1.000 2 2011 2019