Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3815254
rs3815254
LOC101927668
0.925 0.080 7 19943391 non coding transcript exon variant T/C;G snv
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 < 0.001 1 2018 2018
dbSNP: rs25487
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.100 0.750 16 2002 2018
dbSNP: rs763780
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.100 0.700 10 2014 2019
dbSNP: rs4938723
rs4938723
BTG4 ; MIR34B ; MIR34C ; LOC728196
0.574 0.680 11 111511840 intron variant T/C snv 0.32
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.040 0.750 4 2014 2019
dbSNP: rs1047768
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.030 0.667 3 2009 2017
dbSNP: rs1047972
rs1047972
AURKA
0.716 0.240 20 56386407 missense variant T/C snv 0.85 0.84
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.030 1.000 3 2006 2019
dbSNP: rs16999593
rs16999593
DNMT1
0.742 0.240 19 10180505 missense variant T/C snv 2.4E-02 9.6E-03
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.030 1.000 3 2012 2019
dbSNP: rs2296147
rs2296147
ERCC5 ; BIVM-ERCC5
0.695 0.280 13 102846025 5 prime UTR variant T/C snv 0.38
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.030 1.000 3 2012 2019
dbSNP: rs10499563
rs10499563
STEAP1B
0.807 0.120 7 22720869 intron variant T/C snv 0.21
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2013 2017
dbSNP: rs10512263
rs10512263
TGFBR1
0.851 0.120 9 99123789 intron variant T/C snv 6.5E-02
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2014 2018
dbSNP: rs1800896
rs1800896
IL10 ; IL19
0.507 0.800 1 206773552 intron variant T/C snv 0.41
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2011 2018
dbSNP: rs2505901
rs2505901
SVIL ; MIR938
0.925 0.080 10 29602392 intron variant T/C snv 0.48 0.48
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2012 2017
dbSNP: rs4460629
rs4460629 		0.882 0.080 1 155162859 intergenic variant T/C snv 0.56
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2012 2012
dbSNP: rs4833095
rs4833095
TLR1
0.662 0.480 4 38798089 missense variant T/C snv 0.38 0.44
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2015 2018
dbSNP: rs689466
rs689466
PTGS2 ; PACERR
0.637 0.640 1 186681619 upstream gene variant T/C snv 0.17
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2011 2016
dbSNP: rs7560488
rs7560488 		0.851 0.160 2 25345952 upstream gene variant T/C snv 0.40
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.020 1.000 2 2014 2016
dbSNP: rs10116253
rs10116253 		0.851 0.120 9 117702042 upstream gene variant T/C snv 0.28
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2014 2014
dbSNP: rs10484761
rs10484761 		0.807 0.080 6 40834522 intergenic variant T/C snv 0.31
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2014 2014
dbSNP: rs1051690
rs1051690
INSR
0.851 0.080 19 7116952 3 prime UTR variant T/C snv 0.83
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2017 2017
dbSNP: rs1051740
rs1051740
EPHX1
0.592 0.760 1 225831932 missense variant T/C snv 0.32 0.27
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2006 2006
dbSNP: rs1062935
rs1062935
RPTOR ; LOC400627
0.925 0.080 17 80966057 3 prime UTR variant T/C snv 0.40
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2018 2018
dbSNP: rs1127379
rs1127379
SFRP1
0.882 0.120 8 41263761 3 prime UTR variant T/C snv 0.48
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2017 2017
dbSNP: rs11944405
rs11944405
LAMTOR3
0.925 0.080 4 99878804 3 prime UTR variant T/C snv 0.28
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2015 2015
dbSNP: rs12231393
rs12231393
COPZ1
0.925 0.080 12 54318989 intron variant T/C snv 0.14
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2014 2014
dbSNP: rs1235001018
rs1235001018
GOLGB1
0.925 0.080 3 121729917 missense variant T/C snv 1.4E-05
CUI: C0024623
Disease: Malignant neoplasm of stomach
Malignant neoplasm of stomach 		0.010 1.000 1 2007 2007