Source: ALL

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.830 GeneticVariation BEFREE Moreover, we replicated the association between rs12191877 (HLA-C) and type I psoriasis and between type I and type II psoriasis. 26613086

2015
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.830 GeneticVariation BEFREE The results of the univariate analysis showed an association between rs10484879 and psoriasis, although this relationship disappeared after adjustment for HLA-C (rs12191877). 26415694

2015
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.830 GeneticVariation GWASCAT Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. 20953188

2010
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.830 GeneticVariation GWASDB Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. 20953188

2010
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.830 GeneticVariation BEFREE The most significant finding was for SNP rs12191877, which is in tight linkage disequilibrium with HLA-Cw*0602, the consensus risk allele for psoriasis. 19680446

2009
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		T 0.830 GeneticVariation GWASCAT Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways. 19169254

2009
dbSNP: rs12191877
rs12191877
HLA-B
CUI: C0033860
Disease: Psoriasis
Psoriasis 		T 0.830 GeneticVariation GWASDB Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways. 19169254

2009
dbSNP: rs9468925
rs9468925
HLA-B
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.820 GeneticVariation BEFREE Allele G of rs9468925 on HLA-C-HLA-B may be associated with a higher risk of vitiligo. 21951294

2012
dbSNP: rs9468925
rs9468925
HLA-B
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.820 GeneticVariation BEFREE More importantly we find that rs9468925 in HLA-C/HLA-B is associated with both psoriasis and vitiligo, providing first important evidence that two major skin diseases share a common genetic locus in the MHC, and a basis for elucidating the molecular mechanism of skin disorders. 22125590

2011
dbSNP: rs9468925
rs9468925
HLA-B
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.820 GeneticVariation GWASDB Genome-wide association study for vitiligo identifies susceptibility loci at 6q27 and the MHC. 20526339

2010
dbSNP: rs9468925
rs9468925
HLA-B
CUI: C0042900
Disease: Vitiligo
Vitiligo 		0.820 GeneticVariation GWASCAT Genome-wide association study for vitiligo identifies susceptibility loci at 6q27 and the MHC. 20526339

2010
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.810 GeneticVariation BEFREE We investigated, in 461 psoriatic patients and 454 healthy controls, the associations with psoriasis of four single-nucleotide polymorphisms (SNPs) from the psoriasis susceptibility 1 (PSORS1) interval: rs1062470 (PSORS1C1/CDSN), rs887466 (PSORS1C3), rs2894207 and rs10484554 (LOC105375015). 29589160

2018
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		T 0.810 GeneticVariation GWASCAT Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. 26626624

2015
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.810 GeneticVariation GWASDB A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1. 20953190

2010
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		0.810 GeneticVariation GWASCAT A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1. 20953190

2010
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		T 0.810 GeneticVariation GWASCAT A genome-wide association study of psoriasis and psoriatic arthritis identifies new disease loci. 18369459

2008
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0033860
Disease: Psoriasis
Psoriasis 		T 0.810 GeneticVariation GWASDB A genome-wide association study of psoriasis and psoriatic arthritis identifies new disease loci. 18369459

2008
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0001175
Disease: Acquired Immunodeficiency Syndrome
Acquired Immunodeficiency Syndrome 		T 0.800 GeneticVariation GWASCAT Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02). 19115949

2009
dbSNP: rs10484554
rs10484554
HLA-B ; LOC112267902
CUI: C0001175
Disease: Acquired Immunodeficiency Syndrome
Acquired Immunodeficiency Syndrome 		T 0.800 GeneticVariation GWASDB Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02). 19115949

2009
dbSNP: rs13191343
rs13191343
HLA-B ; HLA-C
CUI: C0003872
Disease: Arthritis, Psoriatic
Arthritis, Psoriatic 		T 0.800 GeneticVariation GWASCAT Common variants at TRAF3IP2 are associated with susceptibility to psoriatic arthritis and psoriasis. 20953186

2010
dbSNP: rs13191343
rs13191343
HLA-B ; HLA-C
CUI: C0003872
Disease: Arthritis, Psoriatic
Arthritis, Psoriatic 		T 0.800 GeneticVariation GWASDB Common variants at TRAF3IP2 are associated with susceptibility to psoriatic arthritis and psoriasis. 20953186

2010
dbSNP: rs2247056
rs2247056
HLA-B ; LINC02571 ; LOC112267902
CUI: C0202236
Disease: Triglycerides measurement
Triglycerides measurement 		T 0.800 GeneticVariation GWASCAT A large electronic-health-record-based genome-wide study of serum lipids. 29507422

2018
dbSNP: rs2247056
rs2247056
HLA-B ; LINC02571 ; LOC112267902
CUI: C0202236
Disease: Triglycerides measurement
Triglycerides measurement 		T 0.800 GeneticVariation GWASDB Biological, clinical and population relevance of 95 loci for blood lipids. 20686565

2010
dbSNP: rs2247056
rs2247056
HLA-B ; LINC02571 ; LOC112267902
CUI: C0202236
Disease: Triglycerides measurement
Triglycerides measurement 		T 0.800 GeneticVariation GWASCAT Biological, clinical and population relevance of 95 loci for blood lipids. 20686565

2010
dbSNP: rs2523608
rs2523608
HLA-B ; MIR6891
CUI: C0201910
Disease: Beta-2-microglobulin measurement
Beta-2-microglobulin measurement 		A 0.800 GeneticVariation GWASCAT Genome-wide association study identified the human leukocyte antigen region as a novel locus for plasma beta-2 microglobulin. 23417110

2013