Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs4689388
rs4689388
Diabetes Mellitus, Non-Insulin-Dependent
A 0.820 GeneticVariation GWASCAT Identification of new susceptibility loci for type 2 diabetes and shared etiological pathways with coronary heart disease. 28869590

2017

dbSNP: rs4689388
rs4689388
Diabetes Mellitus, Non-Insulin-Dependent
0.820 GeneticVariation BEFREE A recent T2D GWAS revealed an association signal (rs4689388) upstream of the gene encoding Wolfram syndrome 1 (WFS1) whose intrinsic nucleotide variants had been previously associated with T2D in several candidate gene analyses. 25800097

2016

dbSNP: rs4689388
rs4689388
Diabetes Mellitus, Non-Insulin-Dependent
0.820 GeneticVariation BEFREE Seven of the 29 single nucleotide polymorphisms (SNPs) examined were found to be associated with T2D risk at P ≤ 0.05, including rs6769511 (IGF2BP2), 2 SNPs in the WFS1 gene (rs4689388 and rs1801214), rs7903146 (TCF7L2), and 3 SNPs in the KCNQ1 gene (rs231362, rs2237892, and rs2237897). 23144361

2012

dbSNP: rs4689388
rs4689388
Diabetes Mellitus, Non-Insulin-Dependent
0.820 GeneticVariation GWASDB Genome-wide association and meta-analysis in populations from Starr County, Texas, and Mexico City identify type 2 diabetes susceptibility loci and enrichment for expression quantitative trait loci in top signals. 21647700

2011

dbSNP: rs4689388
rs4689388
Diabetes Mellitus, Non-Insulin-Dependent
T 0.820 GeneticVariation GWASCAT Genetic variant near IRS1 is associated with type 2 diabetes, insulin resistance and hyperinsulinemia. 19734900

2009

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
C 0.810 GeneticVariation GWASCAT Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes. 30054458

2018

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
0.810 GeneticVariation GWASDB Genome-wide association study identifies a novel locus contributing to type 2 diabetes susceptibility in Sikhs of Punjabi origin from India. 23300278

2013

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
0.810 GeneticVariation GWASDB Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. 22885922

2012

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
T 0.810 GeneticVariation GWASCAT Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. 22885922

2012

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
0.810 GeneticVariation BEFREE Seven of the 29 single nucleotide polymorphisms (SNPs) examined were found to be associated with T2D risk at P ≤ 0.05, including rs6769511 (IGF2BP2), 2 SNPs in the WFS1 gene (rs4689388 and rs1801214), rs7903146 (TCF7L2), and 3 SNPs in the KCNQ1 gene (rs231362, rs2237892, and rs2237897). 23144361

2012

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
T 0.810 GeneticVariation GWASCAT Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. 20581827

2010

dbSNP: rs1801214
rs1801214
Diabetes Mellitus, Non-Insulin-Dependent
T 0.810 GeneticVariation GWASDB Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. 20581827

2010

dbSNP: rs4458523
rs4458523
Diabetes Mellitus, Non-Insulin-Dependent
G 0.800 GeneticVariation GWASDB Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility. 24509480

2014

dbSNP: rs4458523
rs4458523
Diabetes Mellitus, Non-Insulin-Dependent
G 0.800 GeneticVariation GWASCAT Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility. 24509480

2014

dbSNP: rs4458523
rs4458523
Diabetes Mellitus, Non-Insulin-Dependent
G 0.800 GeneticVariation GWASCAT Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. 22885922

2012

dbSNP: rs4458523
rs4458523
Diabetes Mellitus, Non-Insulin-Dependent
0.800 GeneticVariation GWASDB Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. 22885922

2012

dbSNP: rs1553876668
rs1553876668
Diabetes Mellitus, Non-Insulin-Dependent
A 0.700 CausalMutation CLINVAR

dbSNP: rs1801212
rs1801212
Diabetes Mellitus, Non-Insulin-Dependent
0.700 GeneticVariation GWASCAT Leveraging Polygenic Functional Enrichment to Improve GWAS Power. 30595370

2019

dbSNP: rs1801212
rs1801212
Diabetes Mellitus, Non-Insulin-Dependent
A 0.700 GeneticVariation GWASCAT Refining the accuracy of validated target identification through coding variant fine-mapping in type 2 diabetes. 29632382

2018

dbSNP: rs4416547
rs4416547
Diabetes Mellitus, Non-Insulin-Dependent
0.700 GeneticVariation GWASDB Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. 22885922

2012

dbSNP: rs4688985
rs4688985
Diabetes Mellitus, Non-Insulin-Dependent
0.700 GeneticVariation GWASDB Large-scale gene-centric meta-analysis across 39 studies identifies type 2 diabetes loci. 22325160

2012

dbSNP: rs10010131
rs10010131
Diabetes Mellitus, Non-Insulin-Dependent
0.060 GeneticVariation BEFREE Our results suggested that the G allele of rs734312 polymorphism [dominant: FEM OR 0.873, 95%CI (0.810 - 0.940), recessive: FEM OR 0.876, 95% CI (0.800 - 0.959)] and A allele of rs10010131 polymorphism [dominant:FEM OR 0.853, 95% CI (0.817 - 0.892), recessive:REM OR 0.833, 95% CI (0.756 - 0.917)] in WFS1 gene had significant protective effects on risk of T2D. 23257691

2013

dbSNP: rs10010131
rs10010131
Diabetes Mellitus, Non-Insulin-Dependent
0.060 GeneticVariation BEFREE While FTO rs8050136 and rs17817449, ADAMTS9 rs4607103, and WFS1 rs10010131 were initially associated with T2DM, this was lost upon multiple testing correction. 24145053

2013

dbSNP: rs10010131
rs10010131
Diabetes Mellitus, Non-Insulin-Dependent
0.060 GeneticVariation BEFREE Nine variants in FTO rs8050136, WFS1 rs10010131, CDKN2A/B rs10811661, KCNJ11 rs5219, CDC123/CAMK1D rs12779790, JAZF1 rs864745, SLC30A8 rs13266634, CDKAL1 rs10946398, and HHEX/IDE rs5015480 were significantly associated with T2DM (P < 0.05). 23298195

2013

dbSNP: rs10010131
rs10010131
Diabetes Mellitus, Non-Insulin-Dependent
0.060 GeneticVariation BEFREE Cox analyses showed an association between the G-allele of rs10010131 and incident type 2 diabetes (HR 1.34, 95% CI 1.08-1.70, p = 0.007). 21127832

2011