Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6299
Gene Symbol: SALL1
SALL1
0.350 GeneticVariation group BEFREE Mutations in SALL1 lead to the dominant multiorgan congenital anomalies that define Townes-Brocks syndrome (TBS). 18470945 2008
Entrez Id: 2138
Gene Symbol: EYA1
EYA1
0.350 Biomarker group BEFREE The present, yet preliminary, observation that renal and temporal bone malformations are less frequent in SIX1-related disease suggests a slightly different clinical profile compared to EYA1-related disease. 17637804 2007
Entrez Id: 6495
Gene Symbol: SIX1
SIX1
0.350 Biomarker group BEFREE The present, yet preliminary, observation that renal and temporal bone malformations are less frequent in SIX1-related disease suggests a slightly different clinical profile compared to EYA1-related disease. 17637804 2007
Entrez Id: 6495
Gene Symbol: SIX1
SIX1
0.350 Biomarker group CTD_human Thymus, kidney and craniofacial abnormalities in Six 1 deficient mice. 12834866 2003
Entrez Id: 6299
Gene Symbol: SALL1
SALL1
0.350 Biomarker group BEFREE The SALL1 gene has been associated with the Townes-Brocks Syndrome (TBS), a disorder characterized by multiorgan dysgenesis including renal and genital malformations. 12065233 2002
Entrez Id: 2138
Gene Symbol: EYA1
EYA1
0.350 Biomarker group CTD_human Eya1-deficient mice lack ears and kidneys and show abnormal apoptosis of organ primordia. 10471511 1999
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 Biomarker group BEFREE Using temporally and spatially controlled genetic manipulations, this study provides the first <i>in vivo</i> report that autonomous FMRP regulates multiple stages of dendritic development, and that selective reduction of postsynaptic FMRP leads to abnormal development of excitatory presynaptic terminals and compromised neurotransmission. 29950504 2018
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 GeneticVariation group BEFREE Don't miss patients with atypical FMR1 mutations: dysmorphism and clinical features in a boy with a partially methylated FMR1 full mutation. 25027833 2014
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 GeneticVariation group BEFREE We analysed 3D facial photographs of 51 males and 15 females with full FMR1 mutations and 9 females with a premutation using dense-surface modelling techniques and a new technique that forms a directed graph with normalized face shapes as nodes and edges linking those with closest dysmorphism. 23211703 2013
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE Targeted deletion of Dll3 in the mouse causes a developmental defect in somite segmentation, and consequently vertebral formation is severely disrupted, closely resembling human SCD. 21147753 2011
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 Biomarker group CTD_human FMR1 gene expansion, large deletion of Xp, and skewed X-inactivation in a girl with mental retardation and autism. 20425835 2010
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 Biomarker group CTD_human Dll3 and Notch1 genetic interactions model axial segmental and craniofacial malformations of human birth defects. 17849441 2007
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE We sequenced the DLL3 gene in 50 patients with congenital vertebral malformations. 17041936 2006
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE To aid in elucidation of the underlying developmental defect in SCDO1, we have generated a mouse model by targeted deletion of the Dll3 gene (Dunwoodie et al., 2002). 12141422 2002
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.310 AlteredExpression group BEFREE The objective of this study was to compare the expression of Folate Receptor-α (FR-α), Reduced Folate Carrier (RFC), and Proton Coupled Folate Transporter (PCFT) in placentas from pregnancies complicated with birth defects (BD) and controls. 30063111 2018
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.310 Biomarker group CTD_human Suppression of Folr1 expression in the nascent cardiac NC by site-directed short-interfering RNA (siRNA) altered cardiac NC cell mitosis and subsequent migration patterns leading to abnormal development of the pharyngeal arch arteries (PAA) and outflow tract. qPCR analysis demonstrated that the siRNA treatment significantly reduced Folr1 24 hr after treatment. 20235221 2010
Entrez Id: 9314
Gene Symbol: KLF4
KLF4
0.300 Biomarker group CTD_human Smooth and cardiac muscle-selective knock-out of Kruppel-like factor 4 causes postnatal death and growth retardation. 20439457 2010
Entrez Id: 1295
Gene Symbol: COL8A1
COL8A1
0.300 Biomarker group CTD_human Taken together, the data identify a new protein essential for notochord morphogenesis, extend our understanding of gene-nutrient interactions in early development, and suggest that human mutations in COL8A1 may cause structural birth defects. 19035365 2008
Entrez Id: 156
Gene Symbol: GRK2
GRK2
0.300 Biomarker group CTD_human Cardiac-specific ablation of G-protein receptor kinase 2 redefines its roles in heart development and beta-adrenergic signaling. 17008600 2006
Entrez Id: 1317
Gene Symbol: SLC31A1
SLC31A1
0.300 Biomarker group CTD_human The copper transporter CTR1 provides an essential function in mammalian embryonic development. 11391004 2001
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.100 Biomarker group BEFREE In cases of d-TGA, the FINE method has a high success rate in generating 3 specific abnormal cardiac views and therefore can be performed to screen for this congenital defect. 31675129 2020
Entrez Id: 1717
Gene Symbol: DHCR7
DHCR7
0.100 Biomarker group BEFREE The case with bilateral renal agenesis presented a novel combination of a null allele and a putative C-terminus missense mutation in the DHCR7 gene CONCLUSIONS: In view of the discrepancy between the prevalence of SLOS among newborns and the carrier frequency of a heterozygous DHCR7 gene mutation, the syndrome-specific internal malformation pattern may be helpful not to miss SLOS diagnosis in fetuses at prenatal ultrasound and fetal autopsy. 31840946 2020
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.100 Biomarker group BEFREE The most frequent a-CGH abnormalities were detected in cases of congenital heart diseases (CDHs), multiple malformations and central nervous system (CNS) malformations. 30638470 2019
Entrez Id: 4807
Gene Symbol: NHLH1
NHLH1
0.100 Biomarker group BEFREE The GREM1 is involved in the etiology of NSCL±P in the Brazilian population and reveal that the interaction between GREM1 and NTN1 may be related with the pathogenesis of this common craniofacial malformation. 30402937 2019
Entrez Id: 4807
Gene Symbol: NHLH1
NHLH1
0.100 GeneticVariation group BEFREE Nonsyndromic cleft lip with or without cleft palate (NSCL/P) is a common birth defect with a complex genetic architecture. 30273098 2019