Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.040 Biomarker disease BEFREE HLA-A and -B haplotypes and frequencies were determined in all 51 probands, 186 CVID or IgGSD index patients without hemochromatosis phenotypes, and 751 controls. 12850493 2004
Entrez Id: 23308
Gene Symbol: ICOSLG
ICOSLG
0.020 Biomarker disease BEFREE ICOS-L deficiency could not be identified in families with AR-CVID. 15507387 2004
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.070 AlteredExpression disease BEFREE TLR9, found intracytoplasmically and on the surface of oligodeoxynucleotide-activated normal B cells, was deficient in CVID B cells, as was TLR9 mRNA. 16424230 2006
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.350 GeneticVariation disease BEFREE CTLA-4 gene exon-1 +49 A/G polymorphism: lack of association with autoimmune disease in patients with common variable immune deficiency. 17192819 2007
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE TNFRSF13B, the gene which encodes transmembrane activator and calcium-modulator and cyclophilin ligand interactor (TACI), is mutated in nearly 10% of patients with common variable immune deficiency (CVID), an antibody deficiency syndrome characterized by loss of memory B cells and plasma cells. 18978466 2008
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE TNFRSF13B, which encodes transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI), is mutated in 10% of patients with common variable immunodeficiency. 20889194 2010
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 Biomarker disease BEFREE TACI (transmembrane activator and calcium modulator and cyclophilin ligand interactor) mutations seem to be associated with autoimmunity and common variable immunodeficiency in humans. 21850030 2012
Entrez Id: 939
Gene Symbol: CD27
CD27
0.090 Biomarker disease BEFREE CD27 is commonly used as marker of memory B cells for the classification of B-cell deficiencies including common variable immune deficiency. 22801960 2013
Entrez Id: 57379
Gene Symbol: AICDA
AICDA
0.030 GeneticVariation disease BEFREE AICDA single nucleotide polymorphism in common variable immunodeficiency and selective IgA deficiency. 23731676 2015
Entrez Id: 115650
Gene Symbol: TNFRSF13C
TNFRSF13C
0.600 AlteredExpression disease BEFREE BAFF-R levels inversely correlated with serum BAFF concentration both in CVID and healthy subjects. 24809296 2014
Entrez Id: 3684
Gene Symbol: ITGAM
ITGAM
0.010 Biomarker disease BEFREE ITGAM encodes the integrin CD11b, a part of complement receptor 3, a novel candidate gene implicated here for the first time in the pathogenesis of CVID. 25678086 2015
Entrez Id: 3812
Gene Symbol: KIR3DL2
KIR3DL2
0.010 Biomarker disease BEFREE Killer-cell immunoglobulin-like receptor and human leukocyte antigen-C genes in common variable immunodeficiency. 25860853 2016
Entrez Id: 3806
Gene Symbol: KIR2DS1
KIR2DS1
0.010 Biomarker disease BEFREE Killer-cell immunoglobulin-like receptor and human leukocyte antigen-C genes in common variable immunodeficiency. 25860853 2016
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE TNFRSF13B hemizygosity does not recapitulate autoimmune features of CVID-associated C104R and A181E TNFRSF13B mutations, which likely encode dominant negative products, but instead reveals selective TACI haploinsufficiency at later stages of B-cell development. 26100089 2015
Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
0.010 GeneticVariation disease BEFREE PIK3CD gain of function mutations are more likely to occur in patients with defective B and T cell responses and should be screened for in CVID and CID, but are less likely in patients with a pure B cell/hypogammaglobulinaemia phenotype. 26437962 2016
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE NFKB2 mutation in common variable immunodeficiency and isolated adrenocorticotropic hormone deficiency: A case report and review of literature. 27749582 2016
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker disease BEFREE FDG PET-CT imaging of therapeutic response in granulomatous lymphocytic interstitial lung disease (GLILD) in common variable immunodeficiency (CVID). 27896807 2017
Entrez Id: 4790
Gene Symbol: NFKB1
NFKB1
0.560 Biomarker disease BEFREE NFKB1, a component of the canonical NF-κB pathway, was recently reported to be mutated in a limited number of CVID patients. 27923702 2017
Entrez Id: 79661
Gene Symbol: NEIL1
NEIL1
0.010 Biomarker disease BEFREE NEIL1 is a candidate gene associated with common variable immunodeficiency in a patient with a chromosome 15q24 deletion. 28093361 2017
Entrez Id: 987
Gene Symbol: LRBA
LRBA
0.050 Biomarker disease BEFREE LPS-responsive beige-like anchor protein (LRBA) deficiency is a primary immunodeficiency categorized as common variable immunodeficiency associated with autoimmune manifestations and inflammatory bowel diseases; however, the clinical spectrum has been extended. 28956255 2017
Entrez Id: 59067
Gene Symbol: IL21
IL21
0.350 Biomarker disease BEFREE IL-21 and anti-CD40 restore Bcl-2 family protein imbalance in vitro in low-survival CD27<sup>+</sup> B cells from CVID patients. 30464201 2018
Entrez Id: 50616
Gene Symbol: IL22
IL22
0.020 Biomarker disease BEFREE IL-21 and anti-CD40 restore Bcl-2 family protein imbalance in vitro in low-survival CD27<sup>+</sup> B cells from CVID patients. 30464201 2018
Entrez Id: 959
Gene Symbol: CD40LG
CD40LG
0.080 AlteredExpression disease BEFREE CD40 ligand expression is defective in a subset of patients with common variable immunodeficiency. 7508119 1994
Entrez Id: 9370
Gene Symbol: ADIPOQ
ADIPOQ
0.020 Biomarker disease BEFREE A better understanding of adiponectin as a link in the cross-talk between the immune system and adipose tissue may provide additional benefits for the management of CVID patients. 31827477 2019
Entrez Id: 50943
Gene Symbol: FOXP3
FOXP3
0.070 GeneticVariation disease BEFREE A child who presented with an IPEX-like syndrome and severe Treg cell deficiency was found to harbor a nonsense mutation in the gene encoding LPS-responsive beige-like anchor (LRBA), which was previously implicated as a cause of common variable immunodeficiency with autoimmunity. 25468195 2015