Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2137
Gene Symbol: EXTL3
EXTL3
0.010 Biomarker disease BEFREE Exostoses like-3 (EXTL3) is a putative tumour suppressor gene but its involvement in colorectal cancer (CRC) is unclear. 18543267 2008
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE EXT 1 gene mutation induces chondrocyte cytoskeletal abnormalities and defective collagen expression in the exostoses. 10934647 2000
Entrez Id: 9970
Gene Symbol: NR1I3
NR1I3
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 407
Gene Symbol: ARR3
ARR3
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 1525
Gene Symbol: CXADR
CXADR
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 6687
Gene Symbol: SPG7
SPG7
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 10206
Gene Symbol: TRIM13
TRIM13
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 846
Gene Symbol: CASR
CASR
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 653108
Gene Symbol: CXADRP1
CXADRP1
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 5573
Gene Symbol: PRKAR1A
PRKAR1A
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 54829
Gene Symbol: ASPN
ASPN
0.020 AlteredExpression disease BEFREE Asporin and transforming growth factor-beta gene expression in osteoblasts from subchondral bone and osteophytes in osteoarthritis. 19997821 2009
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE EXT1 mutations were more commonly observed in those with shoulder exostoses (odds ratio [OR], 20.6; 95% confidence interval [CI], 11.2-28.5; P = .001). 21106401 2011
Entrez Id: 1361
Gene Symbol: CPB2
CPB2
0.010 Biomarker disease BEFREE Cpb2(-/-) mice developed dramatically greater cartilage damage than did wild-type mice (P < 0.01) and had a greater number of osteophytes (P < 0.05) and a greater degree of synovitis (P < 0.05). 24449579 2014
Entrez Id: 7480
Gene Symbol: WNT10B
WNT10B
0.010 Biomarker disease BEFREE Wnt10b and Dkk-1 gene therapy differentially influenced trabecular bone architecture, soft tissue integrity, and osteophytosis in a skeletally mature rat model of osteoarthritis. 27937051 2017
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 Biomarker disease BEFREE VEGF is known to contribute to vascular tidemark invasion and osteophyte formation, which are classic features of advanced OA. 27989872 2017
Entrez Id: 9021
Gene Symbol: SOCS3
SOCS3
0.010 Biomarker disease BEFREE SOCS3 might protect damaged joints by its anti-inflammatory effect and by inhibition of over-augmented cartilage tissue repair, which could exhibit inhibitory properties for joint inflammation, abnormal chondrocyte clustering and osteophyte formation in OA. 28296552 2017
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 Biomarker disease BEFREE CCL2 tertiles showed significant linear associations with presence and progression of knee-rOA and medial joint space narrowing (JSN), but not with presence or progression of osteophytes, bone sclerosis, knee symptoms, or symptomatic knee-rOA. 29723633 2018
Entrez Id: 2353
Gene Symbol: FOS
FOS
0.010 Biomarker disease BEFREE A selective c-Fos/AP-1 inhibitor prevents cartilage destruction and subsequent osteophyte formation. 29476740 2018
Entrez Id: 7439
Gene Symbol: BEST1
BEST1
0.020 Biomarker disease BEFREE After adjustment for age and weight, BMD increased with increasing total DSN score, endplate sclerosis and osteophytosis. 27703044 2017
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.020 Biomarker disease BEFREE After adjustment for age and weight, BMD increased with increasing total DSN score, endplate sclerosis and osteophytosis. 27703044 2017
Entrez Id: 2495
Gene Symbol: FTH1
FTH1
0.010 Biomarker disease BEFREE After L4-5 PLIF, a 63-year-old woman with Parkinson's disease (PD) underwent L3-4 and L5-S1 PLIF for primary adjacent segment disease caused by degenerative change, which was found as facet joint osteophytes and a vacuum disc phenomenon with endplate sclerosis. 30446371 2019
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.070 GeneticVariation disease BEFREE Allelic variation in the vitamin D receptor gene was associated with severity of osteophytosis (adjusted OR "TT" v "tt" 0.41, 95% CI 0.17, 0.97), presence of disc narrowing (adjusted OR "TT" v "tt" 0.45, 95% CI 0.20, 0.99) and weakly with presence of osteophytosis (adjusted OR "TT" v "tt" 0.47, 95% CI 0.19, 1.16) but not with severity of disc narrowing (OR "TT" v "tt" 1.05, 95% CI 0.40, 2.72) or apophyseal arthritis (OR "TT" v "tt" 0.63, 95% CI 0.24, 1.59). 9613338 1998
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE Among the four loci, the exostosis type 1 gene (EXT1) and type 2 gene (EXT2) have been cloned. 11170095 2001
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 Biomarker disease BEFREE Among the four loci, the exostosis type 1 gene (EXT1) and type 2 gene (EXT2) have been cloned. 11170095 2001
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 GeneticVariation disease BEFREE Among the novel mutations in EXT1, c.1004T>G-associated HME exhibited overriding toes and scoliosis, c.1883+2T>A-associated HME exhibited brachydactyly, and c.459_460delCT-associated exostosis arising from vertebra T4 caused spinal cord compression. 21039224 2010