Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease BEFREE A recent genome-wide association study has identified claudin-14 as a major risk gene of hypercalciuric nephrolithiasis. 27191348 2016
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE Genetic mutations in claudin-16 and -19 cause familial hypomagnesemic hypercalciuria with nephrocalcinosis, whereas polymorphisms in claudin-14 are associated with kidney stone risk. 24948743 2015
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE Synonymous variants in claudin-14 have been associated with hypercalciuric nephrolithiasis by genome-wide association studies (GWASs). 27878608 2017
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE Intronic mutations in claudin-14 increase expression causing hypercalciuria and kidney stones. 29782346 2018
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE To test this hypothesis, we sequenced the CLDN14 risk haplotype in a cohort of children with idiopathic hypercalciuria and kidney stones. 28229505 2017
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE For example, common variants in the UMOD and PRKAG2 genes are associated with risk of chronic kidney disease; variants in CLDN14 with risk of kidney stone disease; and variants in or near SHROOM3, STC1, LASS2, GCKR, NAT8/ALMS1, TFDP2, DAB2, SLC34A1, VEGFA, FAM122A/PIP5K1B, ATXN2, DACH1, UBE2Q2/FBXO22, and SLC7A9, with differences in glomerular filtration rate. 20728256 2010
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease BEFREE The only high-throughput genome-wide association study identified claudin 14 (CLDN14) gene as a possible major gene of nephrolithiasis. 20962745 2011
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease GWASCAT We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease BEFREE This study aimed to evaluate the association between genetic defects in vitamin D receptor (VDR), calcium sensing receptor (CaSR) and claudin 14 (CLDN14) genes and kidney stone disease in patients from eastern India. 26107257 2015
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease GWASCAT Common and rare variants associated with kidney stones and biochemical traits. 26272126 2015
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease GWASDB We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.310 Biomarker disease CTD_human Erythrocyte oxidative stress in patients with calcium oxalate stones correlates with stone size and renal tubular damage. 24360074 2014
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.310 AlteredExpression disease BEFREE SK exhibited antilithiatic and diuretic potential in ethylene glycol and sodium oxalate induced urolithiasis in ratsElevated urinary stone markers (Calcium, oxalate, uric acid, magnesium and phosphates) in plasma and renal tubular enzymes (LDH, GGT, ALP, AST ALT) in urolithiatic rats were reversed by SK treatmentSK administration significantly reduced the level of renal stress markers like Urea, Creatinine, LPO and elevated SOD, GPx, GSH levels aiding in nephroprotectionSK also provides structural and functional protection against ethylene glycol- induced renal calculus in rats as evidenced by histopathological studies. 28808392 2017
Entrez Id: 847
Gene Symbol: CAT
CAT
0.300 Biomarker disease CTD_human Erythrocyte oxidative stress in patients with calcium oxalate stones correlates with stone size and renal tubular damage. 24360074 2014
Entrez Id: 2950
Gene Symbol: GSTP1
GSTP1
0.300 Biomarker disease CTD_human Erythrocyte oxidative stress in patients with calcium oxalate stones correlates with stone size and renal tubular damage. 24360074 2014
Entrez Id: 5443
Gene Symbol: POMC
POMC
0.300 Biomarker disease CTD_human Thiazide therapy for ACTH-induced hypercalciuria and nephrolithiasis. 1324751 1992
Entrez Id: 54822
Gene Symbol: TRPM7
TRPM7
0.300 Biomarker disease CTD_human Abnormal differentiation of dopaminergic neurons in zebrafish trpm7 mutant larvae impairs development of the motor pattern. 24291744 2014
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 Biomarker disease BEFREE The association of dpucMGP with incident or recurrent kidney stones was assessed with and without adjustment for clinical, blood, and urine characteristics. 31222647 2020
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease LHGDN Our findings show that an MGP gene polymorphism is associated with kidney stones and influences genetic susceptibility to kidney stones. 17509359 2007
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE Our findings show that an MGP gene polymorphism is associated with kidney stones and influences genetic susceptibility to kidney stones. 17509359 2007
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 Biomarker disease RGD Expression of bone matrix proteins in urolithiasis model rats. 10460895 1999
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE With adjustments applied for sex, age and 24-h urinary volume and calcium excretion, the odds of having prevalent nephrolithiasis [n = 144 (8.2%)] associated with dp-ucMGP was 1.31 [95% confidence interval (CI) 1.04-1.64; P = 0.022]. dp-ucMGP levels were associated (P ≤ 0.001) with MGP variants rs2098435, rs4236 and rs2430692. 28340119 2018
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE We firstly re-sequenced the human genomic MGP gene including the 1500 bp promoter, 5'-UTR, 4 exons and 3'-untranslated regions, identified single nucleotide polymorphisms (SNPs) in MGP, and performed an association analysis with kidney stones in 54 subjects of the Chinese Han population. 23046575 2012
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Epidemiological studies observed that calcium nephrolithiasis was associated with polymorphisms of the CaSR gene regulatory region, rs6776158, located within the promoter-1, rs1501899 located in the intron 1, and rs7652589 in the 5'-untranslated region. 30446806 2019