Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE For example, common variants in the UMOD and PRKAG2 genes are associated with risk of chronic kidney disease; variants in CLDN14 with risk of kidney stone disease; and variants in or near SHROOM3, STC1, LASS2, GCKR, NAT8/ALMS1, TFDP2, DAB2, SLC34A1, VEGFA, FAM122A/PIP5K1B, ATXN2, DACH1, UBE2Q2/FBXO22, and SLC7A9, with differences in glomerular filtration rate. 20728256 2010
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease BEFREE The only high-throughput genome-wide association study identified claudin 14 (CLDN14) gene as a possible major gene of nephrolithiasis. 20962745 2011
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 GeneticVariation disease BEFREE We discovered common, synonymous variants in the CLDN14 gene that associate with kidney stones (OR = 1.25 and P = 4.0 x 10(-12) for rs219780[C]). 19561606 2009
Entrez Id: 23562
Gene Symbol: CLDN14
CLDN14
0.500 Biomarker disease BEFREE This study aimed to evaluate the association between genetic defects in vitamin D receptor (VDR), calcium sensing receptor (CaSR) and claudin 14 (CLDN14) genes and kidney stone disease in patients from eastern India. 26107257 2015
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.310 AlteredExpression disease BEFREE SK exhibited antilithiatic and diuretic potential in ethylene glycol and sodium oxalate induced urolithiasis in ratsElevated urinary stone markers (Calcium, oxalate, uric acid, magnesium and phosphates) in plasma and renal tubular enzymes (LDH, GGT, ALP, AST ALT) in urolithiatic rats were reversed by SK treatmentSK administration significantly reduced the level of renal stress markers like Urea, Creatinine, LPO and elevated SOD, GPx, GSH levels aiding in nephroprotectionSK also provides structural and functional protection against ethylene glycol- induced renal calculus in rats as evidenced by histopathological studies. 28808392 2017
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 Biomarker disease BEFREE The association of dpucMGP with incident or recurrent kidney stones was assessed with and without adjustment for clinical, blood, and urine characteristics. 31222647 2020
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE Our findings show that an MGP gene polymorphism is associated with kidney stones and influences genetic susceptibility to kidney stones. 17509359 2007
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE With adjustments applied for sex, age and 24-h urinary volume and calcium excretion, the odds of having prevalent nephrolithiasis [n = 144 (8.2%)] associated with dp-ucMGP was 1.31 [95% confidence interval (CI) 1.04-1.64; P = 0.022]. dp-ucMGP levels were associated (P ≤ 0.001) with MGP variants rs2098435, rs4236 and rs2430692. 28340119 2018
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.240 GeneticVariation disease BEFREE We firstly re-sequenced the human genomic MGP gene including the 1500 bp promoter, 5'-UTR, 4 exons and 3'-untranslated regions, identified single nucleotide polymorphisms (SNPs) in MGP, and performed an association analysis with kidney stones in 54 subjects of the Chinese Han population. 23046575 2012
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Epidemiological studies observed that calcium nephrolithiasis was associated with polymorphisms of the CaSR gene regulatory region, rs6776158, located within the promoter-1, rs1501899 located in the intron 1, and rs7652589 in the 5'-untranslated region. 30446806 2019
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Heterogeneous disease modeling for Hardy-Weinberg disequilibrium in case-control studies: application to renal stones and calcium-sensing receptor polymorphisms. 19133942 2009
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE SNPs and CATTCA haplotype of the CaSR gene first block is associated with kidney stones in normocitraturic patients. 20067903 2010
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE A genetic polymorphism (rs17251221) in the calcium-sensing receptor gene (CASR) is associated with stone multiplicity in calcium nephrolithiasis. 21966463 2011
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Our study showed that CaSR rs7652589 polymorphism had a significant effect on the risk of developing calcium nephrolithiasis in the population of Yi nationality in Southwestern China. 29682741 2018
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE We conclude that the simultaneous presence of the minor allele at rs1501899 and Arg990Gly may amplify the kidney stone risk in PHPT patients, despite their apparently opposite effects on CASR function in the kidney. 24832896 2015
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Two SNPs in CaSR were genotyped using the TaqMan assay.We found that subjects carrying the G allele of rs6776158 (AG and GG) had significantly higher risk of nephrolithiasis compared to the AA genotype (P = .015 and .009, respectively).Our results indicate that rs6776158 polymorphism that might elevate the risk of nephrolithiasis in the Chinese population. 30407299 2018
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE We identify sequence variants associating with kidney stones at ALPL (rs1256328[T], odds ratio (OR)=1.21, P=5.8 × 10(-10)) and a suggestive association at CASR (rs7627468[A], OR=1.16, P=2.0 × 10(-8)). 26272126 2015
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE This study shows that genetic variants of the CaR gene are not associated with idiopathic hypercalciuria and calcium nephrolithiasis in this population of French Canadians. 10886547 2000
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Dent's disease, an X-linked disorder characterized by low molecular weight proteinuria, hypercalciuria, and nephrolithiasis, is due to mutations of the chloride/proton antiporter, CLC-5; ADHH is associated with activating mutations of the calcium-sensing receptor, which is a G protein-coupled receptor; hypophosphatemic hypercalciuric nephrolithiasis associated with rickets is due to mutations in the type 2c sodium-phosphate cotransporter (NPT2c); and familial hypomagnesemia with hypercalciuria is due to mutations of paracellin-1, which is a member of the claudin family of membrane proteins that form the intercellular tight junction barrier in a variety of epithelia. 17872384 2007
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Polymorphisms located in the regulatory region of the CASR gene may increase susceptibility of the PHPT patients to kidney stone production. 21183554 2011
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Some studies have identified an association of kidney stone formation with vitamin D receptor (VDR) or calcium-sensing receptor (CaSR) polymorphisms. 19887834 2010
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 Biomarker disease BEFREE Calcium-sensing receptor and calcium kidney stones. 22107799 2011
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Genetic population studies tested the association of common allelic CASR variants with serum and urine calcium levels, kidney stone disease, primary hyperparathyroidism and bone mineral density. 24992569 2014
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Dent's disease, an X-linked disorder characterized by low molecular weight proteinuria, hypercalciuria and nephrolithiasis, is due to mutations of the chloride/proton antiporter 5, CLC-5; ADHH is associated with activating mutations of the CaSR, which is a G-protein-coupled receptor; hypophosphatemic hypercalciuric nephrolithiasis associated with rickets is due to mutations in the type 2c sodium-phosphate co-transporter (NPT2c); and familial hypomagnesemia with hypercalciuria is due to mutations of paracellin-1, which is a member of the claudin family of membrane proteins that form the intercellular tight junction barrier in a variety of epithelia. 18446382 2009
Entrez Id: 846
Gene Symbol: CASR
CASR
0.200 GeneticVariation disease BEFREE Our results provide evidences that the CaSR Arg990Gly polymorphism is associated with the risk of nephrolithiasis development in a Chinese population. 28609763 2017