Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10534
Gene Symbol: ZNRD2
ZNRD2
0.010 GeneticVariation disease BEFREE Cyclin D3, skp2 and Ki-67 IR significantly increased from grade I to grade III FL (p = 0.0003, p = 0.0001 and p < 0.0001, respectively), while p27 IR was significantly (p < 0.0001) more prevalent in low-grade tumors. 15305377 2004
Entrez Id: 340152
Gene Symbol: ZC3H12D
ZC3H12D
0.050 Biomarker disease BEFREE We analyzed previously generated whole exome sequencing data of 23 follicular lymphoma cases and one transformed follicular lymphoma case and expanded findings to a combined total of 125 follicular lymphoma/3 transformed follicular lymphoma. 27267853 2016
Entrez Id: 340152
Gene Symbol: ZC3H12D
ZC3H12D
0.050 Biomarker disease BEFREE BCL11A, PAPOLG, PUS10, and USP34) in this amplified locus have not been systematically investigated to date in terms of their role in FL pathogenesis or transformation to tFL. 31410080 2019
Entrez Id: 340152
Gene Symbol: ZC3H12D
ZC3H12D
0.050 Biomarker disease BEFREE Thus, this study aimed to review the most recent research on t-FL in an attempt to better understand the clinical meaning of transformation from FL to diffuse large B cell lymphoma (DLBCL) and the impact of current treatment strategies on the curability of this intriguing subentity of lymphoma. 29043381 2018
Entrez Id: 340152
Gene Symbol: ZC3H12D
ZC3H12D
0.050 Biomarker disease BEFREE Follicular lymphoma and tFL remain incurable tumors highlighted by our inability to eradicate the founder common progenitor cell population with current therapies. 27135979 2016
Entrez Id: 340152
Gene Symbol: ZC3H12D
ZC3H12D
0.050 Biomarker disease BEFREE Moreover, the frequency of mutations attributable to aberrant SHM in tFL was significantly lower than that reported for de novo diffuse large B cell lymphoma, suggesting differing oncogenic mechanisms in transformed follicular lymphoma and de novo diffuse large B cell lymphoma. 18180034 2008
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.030 AlteredExpression disease BEFREE However, ZAP-70 was expressed in a minority of other types of B-cell lymphomas, including precursor B-cell acute lymphoblastic leukemia (25%), diffuse large B-cell lymphoma (26.7%), follicular lymphoma (15.2%), and lymphoplasmacytic lymphoma (9.1%). 16280661 2005
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.030 AlteredExpression disease BEFREE ZAP-70 expression was not detected in diffuse large B-cell lymphoma (n=26), extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (n=24), follicular lymphoma (n=21), plasma cell myeloma/plasmacytoma (n=10), lymphoplasmacytic lymphoma (n=10), or splenic marginal zone lymphoma (n=6). 15133473 2004
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.030 Biomarker disease BEFREE ZAP-70 was positive in 34/52 (65%) CLL, 9/31 (31%) Burkitt's lymphoma, 2/7 (29%) lymphoblastic lymphomas, 3/36 (8%) MCL, 1/23 (4%) marginal zone lymphoma, and 1/45 (2%) diffuse large B-cell lymphomas, but in none of the 19 follicular lymphomas or the 14 Hodgkin lymphomas. 15685592 2005
Entrez Id: 7518
Gene Symbol: XRCC4
XRCC4
0.010 GeneticVariation disease BEFREE The following genotypes in combination with hair dye use before 1980 were associated with FL risk: BRCA2 rs144848 AC+CC [odds ratio (OR) (95% confidence interval (CI)) 3.28(1.27-8.50)], WRN rs1346044 TT [OR(95% CI) 2.70(1.30-5.65)], XRCC3 rs861539 CT+TT [OR(95% CI) 2.76(1.32-5.77)], XRCC4 rs1805377 GG [OR(95% CI) 2.07(1.10-3.90)] and rs1056503 TT [OR(95% CI) 2.17(1.16-4.07)], ERCC1 rs3212961 CC [OR(95% CI) 1.93(1.00-3.72)], RAD23B rs1805329 CC [OR(95% CI) 2.28(1.12-4.64)], and MGMT rs12917 CC, rs2308321 AA, and rs2308327 AA genotypes [OR(95% CI) 1.96(1.06-3.63), 2.02(1.09-3.75), and 2.23(1.16-4.29), respectively]. 25178586 2014
Entrez Id: 7517
Gene Symbol: XRCC3
XRCC3
0.020 GeneticVariation disease BEFREE The following genotypes in combination with hair dye use before 1980 were associated with FL risk: BRCA2 rs144848 AC+CC [odds ratio (OR) (95% confidence interval (CI)) 3.28(1.27-8.50)], WRN rs1346044 TT [OR(95% CI) 2.70(1.30-5.65)], XRCC3 rs861539 CT+TT [OR(95% CI) 2.76(1.32-5.77)], XRCC4 rs1805377 GG [OR(95% CI) 2.07(1.10-3.90)] and rs1056503 TT [OR(95% CI) 2.17(1.16-4.07)], ERCC1 rs3212961 CC [OR(95% CI) 1.93(1.00-3.72)], RAD23B rs1805329 CC [OR(95% CI) 2.28(1.12-4.64)], and MGMT rs12917 CC, rs2308321 AA, and rs2308327 AA genotypes [OR(95% CI) 1.96(1.06-3.63), 2.02(1.09-3.75), and 2.23(1.16-4.29), respectively]. 25178586 2014
Entrez Id: 7517
Gene Symbol: XRCC3
XRCC3
0.020 GeneticVariation disease LHGDN We conclude that polymorphic variation in the XRCC3 gene, but not in ERCC2 or XRCC1, may be of importance for susceptibility to follicular lymphoma, perhaps primarily in current smokers. 16492913 2006
Entrez Id: 7517
Gene Symbol: XRCC3
XRCC3
0.020 Biomarker disease BEFREE In XRCC3, increased risk of follicular lymphoma was suggested for rare homozygotes of three SNPs [Rs3212024: OR, 1.8 (95% CI, 1.1-2.8); Rs3212038: OR, 1.5 (95% CI, 1.0-2.4); Rs3212090: OR, 1.5 (95% CI, 1.0-2.5)]. 16492913 2006
Entrez Id: 7515
Gene Symbol: XRCC1
XRCC1
0.010 Biomarker disease BEFREE We conclude that polymorphic variation in the XRCC3 gene, but not in ERCC2 or XRCC1, may be of importance for susceptibility to follicular lymphoma, perhaps primarily in current smokers. 16492913 2006
Entrez Id: 11060
Gene Symbol: WWP2
WWP2
0.010 AlteredExpression disease BEFREE PTEN expression was elevated in GCB DLBCL and BL compared with RFH, and in GCB DLBCL, non-GCB DLBCL and BL than that in FL; WWP2 expression was higher in FL, GCB DLBCL, non-GCB DLBCL and BL compared with RFH; p53 expression increased in non-GCB DLBCL compared with RFH, and in BL compared with RFH, FL or GCB DLBCL; c-Myc expression was higher in GCB DLBCL, non-GCB DLBCL and BL compared with RFH; c-Myc expression was elevated in GCB DLBCL, non-GCB DLBCL and BL compared with FL. 30899409 2019
Entrez Id: 7486
Gene Symbol: WRN
WRN
0.010 GeneticVariation disease BEFREE The following genotypes in combination with hair dye use before 1980 were associated with FL risk: BRCA2 rs144848 AC+CC [odds ratio (OR) (95% confidence interval (CI)) 3.28(1.27-8.50)], WRN rs1346044 TT [OR(95% CI) 2.70(1.30-5.65)], XRCC3 rs861539 CT+TT [OR(95% CI) 2.76(1.32-5.77)], XRCC4 rs1805377 GG [OR(95% CI) 2.07(1.10-3.90)] and rs1056503 TT [OR(95% CI) 2.17(1.16-4.07)], ERCC1 rs3212961 CC [OR(95% CI) 1.93(1.00-3.72)], RAD23B rs1805329 CC [OR(95% CI) 2.28(1.12-4.64)], and MGMT rs12917 CC, rs2308321 AA, and rs2308327 AA genotypes [OR(95% CI) 1.96(1.06-3.63), 2.02(1.09-3.75), and 2.23(1.16-4.29), respectively]. 25178586 2014
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.020 Biomarker disease BEFREE Vimentin-negative cases included Burkitt's as well as some follicular lymphomas. 1711289 1991
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.020 AlteredExpression disease BEFREE However, the detection of a bcl-2 gene rearrangement is the most valuable criterion in such a situation, and additional immunophenotypic criteria, such as CD10 expression and lack of vimentin within the neoplastic population, further substantiate the diagnosis of a follicular lymphoma in MALT. 8426481 1993
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.010 AlteredExpression disease BEFREE Here, we show that FL patients display higher matrix metalloproteinase (MMP)-9 and vascular endothelial growth factor (VEGF) levels than healthy donors. 21926965 2012
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.010 Biomarker disease BEFREE VDR does not appear to harbor major determinants of NHL risk, except perhaps for follicular lymphoma. 21076051 2011
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.010 AlteredExpression disease BEFREE The transactivating isoforms of p63 are overexpressed in high-grade follicular lymphomas independent of the occurrence of p63 gene amplification. 15887287 2005
Entrez Id: 8239
Gene Symbol: USP9X
USP9X
0.010 AlteredExpression disease BEFREE Increased USP9X expression correlates with increased MCL1 protein in human follicular lymphomas and diffuse large B-cell lymphomas. 20023629 2010
Entrez Id: 9736
Gene Symbol: USP34
USP34
0.010 Biomarker disease BEFREE BCL11A, PAPOLG, PUS10, and USP34) in this amplified locus have not been systematically investigated to date in terms of their role in FL pathogenesis or transformation to tFL. 31410080 2019
Entrez Id: 7306
Gene Symbol: TYRP1
TYRP1
0.010 GeneticVariation disease BEFREE A tandem triplication, trp(1)(q21q32), in a patient with follicular lymphoma: a case study and review of the literature. 19215795 2009
Entrez Id: 7301
Gene Symbol: TYRO3
TYRO3
0.010 GeneticVariation disease BEFREE The combination of t(8;22)(q24;q11), a variant translocation of Burkitt's lymphoma and t(14;18)(q32;q21), typical for follicular lymphoma (FL), was confirmed by FISH and SKY-analysis. 17622530 2007