Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 GeneticVariation disease BEFREE Biobreeding (BB) rat is a typical animal model which develops autoimmune diseases with lymphopenia which results from a frame-shift mutation in the immune-associated nucleotide (IAN) 5 gene. 19762377 2009
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 GeneticVariation disease BEFREE Thus it was hypothesised that genetic variation in GIMAP5 may be involved in susceptibility to other autoimmune disorders where lymphopenia is a key feature, such as systemic lupus erythematosus (SLE). 17220214 2007
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 GeneticVariation disease BEFREE In a large case-control study of Swedish incident type I diabetes patients and controls, 0-34 years of age, we tested the hypothesis that the GIMAP5 gene, a key genetic factor for lymphopenia in spontaneous BioBreeding rat diabetes, is associated with type I diabetes; with islet autoantibodies in incident type I diabetes patients or with age at clinical onset in incident type I diabetes patients. 17641683 2007
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 GeneticVariation disease BEFREE We show that lymphopenia is due to a frameshift deletion in a novel member (Ian5) of the Immune-Associated Nucleotide (IAN)-related gene family, resulting in truncation of a significant portion of the protein. 12097339 2002
Entrez Id: 55340
Gene Symbol: GIMAP5
GIMAP5
0.260 Biomarker disease RGD We show that lymphopenia is due to a frameshift deletion in a novel member (Ian5) of the Immune-Associated Nucleotide (IAN)-related gene family, resulting in truncation of a significant portion of the protein. 12097339 2002
Entrez Id: 940
Gene Symbol: CD28
CD28
0.220 Biomarker disease RGD We have tested the therapeutic potential of a novel class of superagonistic CD28-specific antibodies that induce polyclonal T-cell proliferation without T-cell receptor engagement in an experimental rat model of T lymphopenia. 12750179 2003
Entrez Id: 940
Gene Symbol: CD28
CD28
0.220 Biomarker disease LHGDN Endotoxin-induced lymphopenia was constituted mainly by cells with an immature phenotype (CD45RA(+) CD45RO(-)) that were less likely to undergo apoptosis (CD28(+)), whereas cells with the highest rates of disappearance were characterized by an activated phenotype (CD45RA(-) CD45RO(+)) as well as a phenotype linked to apoptosis (CD95(+) CD28(-)). 11986289 2002
Entrez Id: 940
Gene Symbol: CD28
CD28
0.220 AlteredExpression disease BEFREE We report here an infant with clinical and laboratory features of SCID and selective CD4 lymphopenia and lack of CD28 expression on CD8(+) T cells. 9664084 1998
Entrez Id: 1910
Gene Symbol: EDNRB
EDNRB
0.200 Biomarker disease RGD Lymphopenia in Ednrb-deficient rat was strongly modified by genetic background. 22975636 2012
Entrez Id: 56477
Gene Symbol: CCL28
CCL28
0.200 Biomarker disease RGD Depletion of CD8alpha+ lymphocytes attenuates CCL28 expression in villus epithelia in rats. 19393265 2009
Entrez Id: 7409
Gene Symbol: VAV1
VAV1
0.200 Biomarker disease RGD Differential expression of p95vav in primary lymphoid tissue of BB rats congenic for the lymphopenia gene. 10433093 1999
Entrez Id: 930
Gene Symbol: CD19
CD19
0.140 GeneticVariation disease BEFREE B-cell lineage-specific deletion of the GR (glucocorticoid receptor) in CD19-Cre loxP Nr3c1 mice attenuated lymphocytopenia after transient middle cerebral artery. 30782088 2019
Entrez Id: 930
Gene Symbol: CD19
CD19
0.140 Biomarker disease BEFREE Ultra-high dose rate was equally potent in depleting CD3, CD4, CD8, and CD19 lymphocyte populations in both cardiac and splenic irradiation models of lymphopenia. 31748640 2019
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 GeneticVariation disease BEFREE Autosomal dominant haploinsufficiency of GATA2 causes monocytopenia and natural killer cell lymphopenia, resulting in predisposition to mycobacterial, fungal, and viral infections. 28093780 2018
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 Biomarker disease BEFREE In GATA-2-deficient cases, we found the most profound B-cell lymphopenia, including its progenitors in blood and bone marrow, which correlated with significantly diminished intronRSS-Kde recombination excision circles in comparison to other myelodysplastic syndrome/aplastic anemia cases. 27013649 2016
Entrez Id: 930
Gene Symbol: CD19
CD19
0.140 Biomarker disease BEFREE She also showed persistent lymphopenia with low CD4 T- and CD19 B-cell counts. 24750412 2015
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 AlteredExpression disease BEFREE GATA-2 transcription factor deficiency has recently been described in patients with a propensity towards myeloid malignancy associated with other highly variable phenotypic features: chronic leukocytopenias (dendritic cell-, monocyto-, granulocyto-, lymphocytopenia), increased susceptibility to infections, lymphatic vasculature abnormalities, and sensorineural deafness. 25879889 2015
Entrez Id: 930
Gene Symbol: CD19
CD19
0.140 GeneticVariation disease BEFREE Investigation revealed B-cell lymphopenia (CD19⁺ range, 0.016-0.22 × 10⁹/L) and panhypogammaglobulinemia in most cases. 23553769 2013
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 AlteredExpression disease BEFREE Mutations in the transcription factor GATA2 underlie the syndrome of monocytopenia and B- and natural killer (NK)-cell lymphopenia associated with opportunistic infections and cancers. 23365458 2013
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.140 Biomarker disease HPO
Entrez Id: 930
Gene Symbol: CD19
CD19
0.140 Biomarker disease HPO
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 Biomarker disease BEFREE CORO1A deficiency causes T(-)B(+) natural killer-positive severe combined immunodeficiency or T-cell lymphopenia with severe viral infections. 26476480 2016
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 GeneticVariation disease BEFREE Coronin-1A deficiency is a recently recognized autosomal recessive primary immunodeficiency caused by mutations in CORO1A (OMIM 605000) that results in T-cell lymphopenia and is classified as T(-)B(+)NK(+)severe combined immunodeficiency (SCID). 25073507 2014
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 Biomarker disease BEFREE Most strikingly, coronin 1 deficiencies give rise to immune deficiencies in mice and humans that are characterized by severe T lymphocytopenia. 25269405 2014
Entrez Id: 11151
Gene Symbol: CORO1A
CORO1A
0.130 Biomarker disease HPO