Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5880
Gene Symbol: RAC2
RAC2
0.120 GeneticVariation disease BEFREE We identified 3 patients with de novo RAC2[E62K] mutations resulting in severe T- and B-cell lymphopenia, myeloid dysfunction, and recurrent respiratory infections. 30723080 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.120 GeneticVariation disease BEFREE We describe 1 patient with cytotoxic T-lymphocyte-associated protein 4 (CTLA-4) haploinsufficiency who had recurrent enhancing brain lesions, nodular pulmonary infiltrates, hepatosplenomegaly, immune cytopenias, as well as progressive hypogammaglobulinemia and lymphopenia. 29200144 2018
Entrez Id: 6789
Gene Symbol: STK4
STK4
0.120 Biomarker disease BEFREE Our data should raise physicians' awareness of [1] lymphoma proneness of STK4 deficient patients even in the absence of EBV infection and [2] possibly underlying STK4 deficiency in pediatric patients with a history of recurrent infections, CD4 lymphopenia and lymphoma and unknown genetic make-up. 30386345 2018
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.120 GeneticVariation disease BEFREE CTLA4 mutations were associated with lymphopenia and decreased T-, B-, and natural killer (NK) cell counts. 29729943 2018
Entrez Id: 472
Gene Symbol: ATM
ATM
0.120 Biomarker disease BEFREE Sixty-four children were recalled for follow-up due to low TREC and/or KREC levels, and three patients with immunodeficiency (Artemis-SCID, ATM, and an as yet unclassified T cell lymphopenia/hypogammaglobulinemia) were identified. 27873105 2017
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.120 Biomarker disease BEFREE Therefore, efficient Cxcr4 desensitization is critical for lymphoid differentiation of HSPCs, and its impairment is a key mechanism underpinning the lymphopenia observed in mice and likely in WS patients. 28550161 2017
Entrez Id: 6789
Gene Symbol: STK4
STK4
0.120 GeneticVariation disease BEFREE We report the first case of a child with STK4-mutated CD4+ lymphocytopenia who developed Epstein-Barr virus associated MALT lymphoma arising in the salivary gland. 27163767 2016
Entrez Id: 92579
Gene Symbol: G6PC3
G6PC3
0.120 Biomarker disease BEFREE Our experience suggests that a diagnosis of congenital neutropenia due to G6PC3 may not be as straightforward in such patients with combined lymphopenia and thrombocytopenia. 26479985 2015
Entrez Id: 472
Gene Symbol: ATM
ATM
0.120 GeneticVariation disease BEFREE These findings identify the genomic instability associated with V(D)J recombination at the TCRδ locus as the molecular origin of both lymphocytopenia and the signature t(12;14) translocations associated with ATM deficiency. 25721125 2015
Entrez Id: 92579
Gene Symbol: G6PC3
G6PC3
0.120 Biomarker disease BEFREE Here we investigate the findings of T cell lymphopenia and inflammatory bowel disease in a child with G6PC3 deficiency due to compound heterozygous mutations in intron 3 (c.IVS3-1 G>A) and exon 6 (c.G778G/C; p.Gly260/Arg). 23180359 2013
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.120 Biomarker disease BEFREE In contrast, Cxcr4(+/1013) mice show defective thymopoiesis and B-cell development, accounting for circulating lymphopenia. 22438253 2012
Entrez Id: 5880
Gene Symbol: RAC2
RAC2
0.120 GeneticVariation disease BEFREE The causes of the T-cell lymphopenia included DiGeorge syndrome (n = 2), idiopathic T-cell lymphopenia (n = 2), extravascular extravasation of lymphocytes (n = 3), and a Rac2 mutation (n = 1). 19996402 2009
Entrez Id: 6789
Gene Symbol: STK4
STK4
0.120 Biomarker disease HPO
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.120 Biomarker disease HPO
Entrez Id: 472
Gene Symbol: ATM
ATM
0.120 Biomarker disease HPO
Entrez Id: 5880
Gene Symbol: RAC2
RAC2
0.120 GeneticVariation disease CLINVAR
Entrez Id: 92579
Gene Symbol: G6PC3
G6PC3
0.120 Biomarker disease HPO
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.120 Biomarker disease HPO
Entrez Id: 1794
Gene Symbol: DOCK2
DOCK2
0.110 Biomarker disease BEFREE Although absence of DOCK2 leads to lymphopenia, little is known about the signaling mechanisms and physiologic functions of DOCK2 in B cells. 31405607 2019
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.110 Biomarker disease BEFREE DNA ligase 4 deficiency (LIG4-SCID) causes lymphopenia (T-B-NK<sup>+</sup>) and a radiosensitive SCID (RS-SCID) phenotype. 30061307 2018
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.110 GeneticVariation disease BEFREE In the pediatric CVID cohort, underweight status was significantly associated with lymphopenia. 29619656 2018
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.110 Biomarker disease BEFREE The purpose of this review was to critically analyse the literature on invasive fungal infections (IFIs) occurring in association with mAbs and fusion proteins other than tumour necrosis alpha (TNF-α) inhibitors, including therapeutics modulating T-cell-mediated pathologies (muromonab, abatacept, belatacept, ipilimumab, basiliximab, daclizumab), inducing lymphopenia (alemtuzumab), depleting CD20+ B cells (rituximab) and interfering with various targets (anakinra, natalizumab, blodalumab, ixekizumab and others) with a focus on children, and to provide a framework of evaluating the risk for IFIs in this population. 28444889 2017
Entrez Id: 6772
Gene Symbol: STAT1
STAT1
0.110 GeneticVariation disease BEFREE Patients with heterozygous STAT1 gain-of-function (GOF) mutations usually present with chronic mucocutaneous candidiasis (CMC) but may also experience bacterial and viral infections, autoimmune manifestations, lymphopenia, cerebral aneurysms, and increased risk to develop tumors. 27803128 2017
Entrez Id: 4478
Gene Symbol: MSN
MSN
0.110 Biomarker disease BEFREE Mutations in the moesin gene in humans are associated with primary immunodeficiency with profound lymphopenia, and moesin-deficient mice exhibit a similar lymphopenia phenotype. 28978692 2017
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.110 CausalMutation disease CLINVAR Extreme growth failure is a common presentation of ligase IV deficiency. 24123394 2014